Contarinia nasturtii (swede midge): 116352122
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Entry
116352122 CDS
T08003
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116352122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cns03021
]
116352122
03036 Chromosome and associated proteins [BR:
cns03036
]
116352122
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116352122
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116352122
PBAF complex
116352122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116352122
NCBI-ProteinID:
XP_031640288
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MALPQNCKQLSGSTMMPGTPGNHSHMMSSSPVTFNILKERLRASGGSSQSDRNKDSNPFS
HNSHGNPAFTPQKVSKTSNIFDPKTPRPPKPPEKPLMPYMRYSRRVWDNVKTENPDHKLW
EIGKIIGFMWRELPSRERQEYIDEYEQEKAEYDKALKAYHNSPAFLQYLAAKNKAKASNE
NDSHDTPSRPTKASQQDRRIDIQPAEDEEDQDDGYSVKHVAYARFVRNHRLINEIFSDMA
VPDVRTVVTTNRMIVLRKQVNSLTMHQMKLEAELLQMEEKFEAKKRKLIESSESFQEELK
KHCKPAVDDETFQKMVDRQYELMHRPRMIDEMNNTKILTRPDDVEMQNSVEHQAPNQATE
APVSDHEMIVLHQSIQPMKTENCAVPAQNDLKKEELTTNTESTTSEPVPSDTEKEQEQKE
PEPQDVPTVAPSTIQPVVVANEPEIEKTEKEKTSEPPEETTPSQQQQQPPAEEKPAAEPE
TTEKDEKEQIRENSEATTPDNKESKPSPVEALNSSQLLTTSESTPVPTKEQTSPATVPNS
TPVQPNQIPPPHAGMMPPHQAHPNYPAGYPPRTYQHQQQNPQYASQYAPGPQYGYPMYPH
PPTNYQPYYRQGPHYPSEHGAPVMPPGPNPVMNEPPQMYGPLPPGQPPQQPQQQSPSQPA
PTPMEIEANEKDKKPEFVNGDTSSKLDTPAE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcattaccgcaaaattgtaagcaattatctggatcgactatgatgcctggaacgccg
ggaaatcattcgcatatgatgtcctcttcacccgttactttcaacattttgaaagaacgg
ctgcgtgcatctggtggatcaagtcaatcagatcgaaataaggattcgaatccattttct
cacaatagccatggtaatccagcttttacaccacaaaaagtcagcaaaacctcaaacatt
tttgatccaaagacacctagaccaccaaaaccaccagaaaaaccattaatgccatacatg
agatattcacgtcgtgtttgggataatgtcaaaaccgaaaatcccgatcacaagttatgg
gaaatcggaaaaattattggttttatgtggcgtgaactaccttcaagggaacgacaagag
tacattgatgaatatgaacaagaaaaggcagagtatgataaagcgttgaaagcatatcac
aattcaccagcatttttgcaatatttggcagccaagaacaaggcaaaagcaagtaacgaa
aatgactcgcacgacacaccgtcacggccaacaaaagcatcacaacaagatcgtcgcatt
gatattcaaccagctgaagacgaagaagatcaagatgatggctattccgttaaacacgtc
gcatatgctcgttttgtacgcaatcatcgtcttatcaatgagattttctcggatatggct
gtgccagatgtacgcaccgttgtcactaccaatcgtatgattgttttacgcaaacaagtt
aattcattgactatgcatcaaatgaaactagaagctgaactattgcaaatggaagagaaa
tttgaggcaaaaaagcgaaaattgatcgaatcaagtgaatcatttcaagaagaactgaaa
aagcattgcaagccggctgtagatgatgaaacgtttcaaaaaatggtagaccgtcagtat
gagttgatgcatagaccacgaatgatagatgaaatgaataatacaaagattttaacaaga
ccagatgatgtagaaatgcaaaatagtgttgagcatcaagcaccaaatcaagctaccgaa
gcaccagtcagtgatcatgagatgattgtcttgcatcaatccatacagccaatgaaaaca
gaaaactgtgctgtgccagctcaaaatgatttgaaaaaggaagaattgactacaaacacc
gaatcaacaacatcagaaccagtaccaagtgatacagaaaaggaacaagagcaaaaagaa
cccgaaccgcaagatgtcccaacagttgcaccgtcgacaattcaaccagtcgtggttgca
aatgagcccgaaattgaaaaaacggaaaaagaaaagacatccgaacctccagaagaaaca
acaccatcgcaacaacagcaacagccaccagccgaagaaaaaccagctgcagagccagaa
acaaccgagaaagatgagaaggaacaaattagggagaattcggaggccacaacgccagac
aataaagaatcaaaaccgtctccagttgaagcgctcaattcaagtcagctgttgactaca
tcagaaagtacaccagtaccaacaaaagaacaaacatcaccggcaacagttcctaatagt
acacctgttcaaccaaatcaaattccaccaccacacgctggaatgatgcctccacaccaa
gcacatccaaactatccagctggctatcctccgcgcacatatcaacatcaacagcagaat
ccgcaatatgcgtcacaatatgcgcctggtcctcaatacggctacccaatgtatccgcat
ccaccaactaattaccaaccatattatcgacagggaccgcattatccatctgagcacgga
gctcccgtaatgccaccaggcccgaatccagtcatgaatgaaccacctcaaatgtacgga
ccattaccaccaggtcaaccaccacaacaaccgcaacaacagtcaccgtcacaaccagca
ccaactccaatggaaattgaggcaaacgaaaaagacaaaaaaccagaattcgtcaatggt
gacacctcatcaaaactggatacaccagcggaatga
DBGET
integrated database retrieval system
