Contarinia nasturtii (swede midge): 116352171
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Entry
116352171 CDS
T08003
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04820
Cytoskeleton in muscle cells
cns05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116352171
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116352171
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cns04812
]
116352171
04147 Exosome [BR:
cns04147
]
116352171
Cytoskeleton proteins [BR:
cns04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116352171
Exosome [BR:
cns04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116352171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_R4
Talin_IBS2B
I_LWEQ
COG2_N
DUF7783
Motif
Other DBs
NCBI-GeneID:
116352171
NCBI-ProteinID:
XP_031640422
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MPVFHTKTIESILEPVASQVSRLVILHEEAEDGNAMPDLSRPVQAVSSAVANLIKVGRET
ITGSDDEILKREMPASLTRVETASHLLEDAAAMLRPDPYSGPARKKLIEGSRGILQGTSS
LLLCFDESEVRKIIRECKRVLDYLAVSEVIDTMEDLVQFLKDLSPCLSKVSREVSAREKE
LTHQVHSEILVRCLEQVKILAPILICSMKVYIHIVEQGGKGAEEASENRNYLASRMSEEI
QEIIRVLQLTTYDEDTSELDNLTVLKKIQNSIINKMGPALDWLANPYALRGGVGEKALRQ
ILDNAYRVADRCLPQDAAVIRKLADDISRATNELCDLRQAGKGNTPQAEQLAREIRDKLG
NLERAVTKAVIGVDKAGHQAAHTVQGRLEQACRWLQNPNIDDKGVGKRAIDLIIDEGKKV
AEGLPGHQKVEILQLCDEVDQLANQFAKLCAQGLGNTPEAQEIARKLNAKLHELKGKIQQ
ALVNRVVEDFMDVSTPLKQFSDAVNVPEGTPGREQNFNQKANNLQAFSDRASKTSRMVAA
GGSGGNKRIAEELLGSAAQIDSLTPQLVSAGRIKMNYPASKAADEHLNNLKQQYADTILR
MRTLCDQATDPAEFIKASEEQMQKYTFLCEEAIRNKQPQKMVDNTSNIARLVNRVLLVAK
QEADNSEDPEFIAKVNAATNRLEQSLPLMVQNAKAVAANINDPVAASHWREANKNLLNAV
RGVRGAIVTPPEVPILPDLAALNLRHQEQIPPRPPLPSENRYVSNIPPVRPPLPTETDDE
AAVFRRAPLPNQPILLAAHGLHQEVRQWDSQDNELIAAAKRMAILMARLSELVHSDSKSS
KRELIATAKMIAEASEDVTRLAKQLARECTDKRIRTNLLQVCERIPTIGTQLKILSTVKA
TMLGAQGSDEDREATEMLVGNAQNLMQSVKETVRAAEGASIKIRSDQTNQRLRWVRRQPW
YQYA
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgccagtttttcatacaaaaacaatcgaaagcattttggaacctgttgcctcacaggtt
tcccgtttggtgattttgcacgaagaagccgaagatggaaatgcaatgccagatcttagc
cgacccgttcaagcggtatcgtcggctgttgcaaatttaattaaagtcggccgtgaaaca
atcaccggttccgatgatgaaatcttaaaacgtgaaatgcctgcatcattgacccgagtc
gaaactgcatcgcatttattggaagatgcggctgcaatgttacgccccgatccgtactca
ggaccagcccgaaaaaagttgatcgaaggttcacgtggtattttgcaaggtacatcatca
ttgttactgtgcttcgacgaatcggaagtacgaaaaataatccgtgaatgtaaacgtgta
ttggattacttggccgtatccgaagtcattgacaccatggaagatttggtgcaattctta
aaagatctcagtccatgtttgagcaaagtatcgcgtgaagtgagcgctcgtgaaaaagaa
ctaacacatcaagtgcacagcgaaattttggtacgctgtttggagcaagtgaaaattttg
gcgccaattttaatttgcagcatgaaagtctacattcacattgttgaacaaggtggaaaa
ggtgccgaagaagcatcggagaatcgtaattatttggcatcacgcatgagcgaagaaatt
caagagattattcgtgtactacaattgaccacatatgatgaagacaccagcgaattggac
aatttgaccgtgttgaagaagatccaaaacagcatcatcaataaaatgggaccggctctc
gattggttggccaatccatacgccctacgtggtggagttggtgaaaaggctttgcgtcaa
attctcgataatgcgtatcgcgttgccgatcgttgtttgccacaagatgctgctgttatt
cgtaaattggctgatgatatctcaagagccacgaatgaattgtgcgatttgcgtcaagcc
ggcaaaggcaataccccacaagctgaacaattggctcgtgaaattcgtgataaacttggt
aatctcgaacgtgccgtcacaaaagcagttattggcgttgataaggccgggcatcaagct
gcacataccgtacaaggtcgtcttgaacaagcttgtcgttggctacaaaatccaaatatt
gacgacaaaggtgtcggaaaacgtgcaatcgatttaatcattgacgaaggcaagaaggtg
gcagaaggtttgcccggccatcaaaaagtcgaaattttacaattgtgtgacgaagttgat
caattggcaaatcaatttgcaaaattgtgcgctcaaggtttgggaaatacaccagaagca
caagaaatcgcccgtaaattgaacgcaaaattgcatgagctcaaaggtaaaattcaacaa
gcgttggtgaatcgtgtggtcgaagatttcatggatgtatcaacgccattgaaacaattc
tccgatgctgtcaatgtgccagaaggtacaccgggccgtgagcaaaatttcaatcaaaaa
gccaacaatttgcaagcattcagcgatcgtgcatcgaaaacaagtcgtatggtcgccgct
ggtggttcgggtggtaataagagaatcgccgaagagctattaggttcggccgctcaaatc
gatagtctcacaccacaactggtatcggccggccgcatcaaaatgaattatccagcaagc
aaagcggccgacgaacatttgaacaatttaaaacaacaatatgccgacaccattttacgc
atgcgtacattgtgcgatcaagcaaccgatccagccgaattcatcaaagcatccgaagaa
caaatgcaaaaatatacgttcttatgtgaagaggcaattcgcaataaacaaccacaaaaa
atggtcgacaatacatcgaacattgcacgcttggttaaccgtgttctgttggtcgccaaa
caagaggccgacaactccgaagatccagaattcattgctaaagtaaatgcagctaccaat
agattagagcaaagtttaccgttgatggtgcaaaatgctaaagccgttgcagccaatatt
aacgatccagttgccgcatcacattggcgcgaagcaaacaaaaaccttttgaatgccgta
cgtggagttcgtggtgccattgttacaccgccagaagtgccaatcttgcctgatttagcc
gctcttaacttaagacatcaagaacaaattccaccacgtccaccacttccaagtgaaaat
cgttatgtgagtaatattccaccagtgcgtccaccattaccaaccgaaaccgatgatgaa
gcggccgttttccgacgtgcaccattgccaaatcaaccaattcttcttgccgcccacggt
ttgcatcaagaggttcgtcaatgggattctcaggacaacgaattgattgcggctgctaaa
cgtatggccatacttatggcacgtctatccgaattggtgcattcagattcaaagagcagc
aaacgcgaattgattgccaccgccaaaatgattgccgaagcatctgaagatgtaacacgt
cttgccaaacaattagctcgcgaatgtactgacaaacgtattcgcacgaacttgcttcaa
gtttgtgaacgaattccaaccattggtacacaattgaaaattttgtcaacggtcaaagcg
actatgcttggtgcacaaggttcggacgaagatcgtgaggccaccgaaatgttggttgga
aatgcacaaaacttgatgcaaagtgtaaaagaaaccgtacgtgctgcagaaggtgcaagt
atcaaaattcgttcggatcaaacaaatcaacgattgcgttgggttcgacgtcaaccatgg
tatcaatatgcataa
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