Contarinia nasturtii (swede midge): 116352202 Help Entry 116352202         CDS       T08003                                  Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism cns  Contarinia nasturtii (swede midge) Pathway cns03040   Spliceosome Brite KEGG Orthology (KO) [BR:cns00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     116352202  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cns03021]     116352202    03041 Spliceosome [BR:cns03041]     116352202    03036 Chromosome and associated proteins [BR:cns03036]     116352202 Transcription machinery [BR:cns03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      116352202 Spliceosome [BR:cns03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     116352202  Complex B     116352202  Complex C    U2 SnRNP specific factors     116352202 Chromosome and associated proteins [BR:cns03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      116352202     TFTC complex      116352202 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A WDR55 Motif Other DBs NCBI-GeneID:  116352202 NCBI-ProteinID:  XP_031640470 LinkDB All DBs Position Unknown AA seq 1219 aa AA seqDB search MYLYNLTLQHSTAITHAVHGSFSGTKSQEILVSRGKSLELLRPDPNTGKMHTLLTVEVFG VIRSLMTFRLIGGSKDFAVVGSDSGRIIILEYIPSKNVLEKVHQETFGKSGCRRIVPGQY LAIDPKGRAVMIGAVEKQKLVYILNRDSDARLTISSPLEAHKSNTLTYHMVGVDVGFENP MFACLEIDYEKSDADPSGEAAQQTQQTLTFYELDLSSNHVVRKYSEPLEEYANFLISVPG GKDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHRTKSMYF FLVQSEQGDIFKVTLETEDDVVSEIKLKYFDTVPPATSMCVLKTGFLFIACDFGNHYLYQ IAHLGDEDDEPEFSSAMPLEEGDTFFFAPRLLKNLVMVDELHSYAPILGCQVADLANEDT PQLYLMCGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEYDAYIIVSFVN ATLVLSIGDTVEEVTDSGFLGTTPTLCCSSLGDDALVQVYPEGIRHIRADKRVNEWKAPG KKTISKCAVNQRQVVIALSGGELVYFEMDPTGQLNEYTERKRMPSDVLCMALGTVPPGEQ RSWFLAVGLADNTVRIISLDPSECLSPRSMQALPSSAESLCIVEMGVADSIETESGNMQT SGSLHLNIGLSNGVLLRTSLDPVTGDLADTRTRYLGSRPVKLFRIKIKGYESVLAMSSRT WLSYYFQNRFYLTPLSYESLEFASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQITF PLEYTPRRFTIHSDTCRLIVAETDHNAYTEDTKSIRKMQMAEEMREAAGEDEQDLANEMA EAFINEVLPENIFSAPKAGVGMWASVIRIIEPAHGHTIHKVKLAQNEAIVSMCTAKFHST MDGRTYLAIGIAKDLQLNPRLNNGGCIDIYRIDVTCSNLELVHRTEMDEVPGALCAFQGR LVAGIGKILRIYDLGKKKLLRKCENKHIPNQIVNIQSMGQRIYVADVQESTYFVRYKRAE NQIIIFADDTHPRWITSMTLLDYDTIATGDKFGNISILRLPHSVTDDVDEDPTGTKSLWD RGLLSGASQKAENIGTIHIGEIVMSMQKATLIPGGSESLIYATINGSVGALVPFTSREDY DFFQHLEMHMRNENPPLCGRDHLSYRSYYYPVKNIMDGDLCEQFTSLDLTKQKNIANDLG RTPNEVAKKLEDIRTRYAF NT seq 3660 nt NT seq  +upstreamnt  +downstreamnt atgtatttgtataatttaacgttacagcattcaactgcaattacacatgcggttcatggt agtttttctggaacaaagtctcaagagattttggtatcacgcggcaagagcttagaatta ttacgaccagatccaaatacagggaaaatgcacacccttttgacagttgaagtatttggt gttatacgatcgctcatgacatttcgtttgattggtggatccaaagattttgctgtagtt ggttctgactctgggcgtattattatattggaatacataccatcgaaaaacgtattggaa aaggtgcatcaggaaacatttggaaaatcgggatgtcgtcgaattgtacctggtcaatat ttggcaattgatccaaaaggtcgcgctgtaatgatcggtgcagttgaaaaacaaaaattg gtttatattttaaatcgcgattcggatgctcgattaacaatttcctcaccattggaggca cataagtccaacactttaacatatcatatggttggtgttgatgttggttttgaaaatcca atgtttgcatgtcttgaaatcgactacgaaaaatctgacgcagatccatctggtgaagca gctcaacaaacacaacaaactctgaccttttatgaactcgatttgtcatcaaatcatgta gtacgaaaatattcagagcccctagaggagtatgcaaactttctcatttcagtacctgga ggtaaggatggaccttctggtgttttgatttgttctgaaaattatttaacatataaaaac ctgggagaccagcatgatattcgttgtccaataccacgaagacgtaacgatttggatgat cccgaacggggcatgatttttgtttgttctgctacccatcgcacaaaatcaatgtatttt ttcctagtccagtctgaacaaggcgatatattcaaagtgacattagaaacagaagatgat gttgtatccgagataaaactcaagtattttgatacagtaccaccagcaacgtcaatgtgt gtcctgaaaactggatttctattcattgcttgtgattttgggaatcattatttgtaccaa atagcccatctgggagatgaagacgatgagcctgaatttagttcagcaatgcctttagaa gaaggtgatacatttttctttgcgcctaggcttttgaaaaatttagtaatggtagatgag ctacattcgtacgcaccaatattggggtgccaagttgcagacttagccaatgaagataca ccacagttatatttaatgtgtggccgaggtccgcgctcttcattacgagtattacgtcat ggattggaagtgtctgaaatggctgtatctgagcttcctggaaatccaaatgccgtatgg acagtaaaaaaacgagctgatgatgaatatgatgcgtatatcattgtttcgtttgtgaat gccaccttggtgcttagcattggtgacaccgttgaagaagtaacagatagtggttttttg ggaactactcctacactttgttgctcttctcttggtgatgatgcattggtacaagtatat cctgaaggtattcgacatattcgagcagataaacgagtcaatgagtggaaagcacccggg aagaaaacaatatcgaaatgtgcagttaatcaacgacaagtcgtgattgctttatctggt ggcgagttggtctattttgaaatggatccaactggccaattgaatgaatatacagagaga aagcggatgccttcagatgttttatgtatggctctgggtacagtgccgccaggcgaacaa cgttcctggtttttagccgttggattggctgacaatacagttcgcataatatcattggac ccctccgaatgcttatcaccaagatcaatgcaagccctgccttcatcagctgagtctttg tgtattgttgaaatgggtgttgcagattcaattgaaactgaaagtggaaacatgcaaaca agtggttcattacatttgaacattggtttaagtaatggtgttttacttcgtacatcatta gatcctgtgactggtgatttggcagatacaaggacacgttatttgggatctcggccagtt aaactattccgcataaaaattaaaggctacgaatctgtcctagcaatgtctagccgaact tggttgagctactatttccaaaaccggttttatttgacgccgttgtcgtatgaatcacta gaatttgcttcagggttttctagtgaacaatgttcggaaggaattgttgccatttctaca aatactttgagaattctggctttggaaaaacttggtgcagttttcaatcaaatcacgttc ccactcgaatacacgcctcgtcgctttacaatacatagcgatacatgtcgactgatagtt gctgaaactgatcataatgcttacacagaagataccaaaagtattcgtaaaatgcaaatg gctgaggagatgcgagaagcagcaggagaagatgaacaagatttggccaatgaaatggca gaagctttcatcaatgaagtactgcctgaaaatatattttcagcaccaaaggctggagtt ggtatgtgggcgtcagttattcgtataattgagccagctcatggacatacaatacataag gtaaaattggcgcaaaatgaagcaatcgtctcaatgtgcaccgcaaaatttcactcgaca atggatggaagaacatacttggctattggtattgcaaaggatctgcagttgaatccacga ttaaacaatggtggatgcattgatatttatcgcattgatgtcacatgttctaatttggag ctcgttcatcgtactgaaatggatgaagtgccaggtgcattatgtgcattccaaggaaga ctcgtagcaggcattggaaagattttgcgtatttatgatttgggcaaaaagaaactcttg cgaaaatgcgaaaacaaacatataccgaatcaaattgtgaatattcaatctatgggacaa cgtatctatgtagccgatgtgcaagagtctacatattttgtccgatataaacgtgctgaa aaccaaataatcatttttgccgatgatacacatccacgttggataacatcgatgacatta cttgattacgacacaatcgcaacaggcgacaaatttggtaatatttcaattttgcgcctt ccacactcagttactgatgatgtagatgaggacccaaccggtactaaatcattatgggat cggggactattaagtggtgcttcacagaaagctgaaaatattggaactattcacataggc gagattgtaatgtcgatgcaaaaagcaactctaataccgggaggttctgaatccctaata tatgctacgattaatggatctgtgggtgctttggttccatttacaagccgtgaagactat gactttttccaacacttggaaatgcatatgcgaaatgaaaatccaccgctttgcggccgt gatcacctaagttatagaagctattattatcccgttaagaatatcatggatggagatctc tgtgagcagtttacatcgttagacttaacaaagcaaaagaacatagcaaatgatttgggt cgaactcccaacgaagtggcaaaaaaacttgaagacattcgaacaagatatgcattttaa

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