Contarinia nasturtii (swede midge): 116352274
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Entry
116352274 CDS
T08003
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116352274
03012 Translation factors [BR:
cns03012
]
116352274
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
116352274
Translation factors [BR:
cns03012
]
Eukaryotic type
Initiation factors
eIF-3
116352274
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
WD40_WDHD1_1st
RRM_1
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_ELP1_1st
Beta-prop_WDR3_1st
CFAP251_N
RRM_ACIN1
IBN_N
Motif
Other DBs
NCBI-GeneID:
116352274
NCBI-ProteinID:
XP_031640614
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MAKKRTEERNDENVDGEEPCFDDPEDFVDDISDQELLGDLLKQRPSETDGVENVVIVDNI
PKVDPSRQEKLKTVIHKLFSTCGEVTNTFYPLDDEGNTKGYCFLEYKNAENAEEAVKTLH
NHRLDRKFTFAVNLFTDFQKYEHIPENWTPPTPQPYKVQSDLYTFLTEQDAYDQYCVAAE
GPQNGVQVQFWQNTLPEPTILETRERFTDTFVKWSPLGTYIVTFHKQGVAIWGGSTFTRI
NKFPQAGTQFVDFSPCEKYLVTYGPTATGQKIIIWDIRTGQEKRSFVSEGSASNMSMFRW
SHDDRYVARMGDEAIHIYETPSFYLLDMKSIKIPKLRNFSWSPTDNIIAYWVAEQTDVPA
KVTLMKIPRLEEIRNKNLFNVADCKIHWQKSGDYLCVKVDRFSKSRKDKKDSDVKFLGMF
YNFEIFHMREKDIPVDSVEIKEMILAFAWEPIGTKFSIIHGESSSANVSFYEVKKGQKIS
LVKKLDKKQCSHLFWSPRGSFIVLANLTMGTFEFVDTNNDFIVMNSCDHFRASDVEWDPT
GRYCVTGVSAWKVKEDNGYNMWSFQGKIMKRVMLKNFVQYLWRPRPPTLLTEQQQKEIKK
NLKKYYPQFEQKDRLRMTRASKELLEKRATLREQFMEYRNKRIEEWKEQKQSRMALRSHL
DTDELNRDELEEEIVEVLIKEETTIIE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaaagaacagaagagagaaatgatgaaaatgtagatggtgaagagccctgt
tttgatgatccagaagattttgttgatgacatatcagatcaagaactgttgggtgatctg
ttaaagcaacgaccaagtgaaaccgatggtgttgaaaatgttgtaattgttgacaacata
ccaaaagttgatccgtcgcgtcaagaaaaattgaaaaccgtcattcacaagctattctca
acttgcggtgaagtcaccaacactttctatccccttgatgatgaaggcaatacgaaaggc
tactgctttttagaatataaaaatgctgaaaatgccgaagaagctgtaaaaactctgcac
aaccatcgtttggatcgtaaatttacatttgctgtgaatttatttaccgattttcaaaag
tacgagcatataccagagaactggactccaccaacacctcaaccgtataaagttcaaagc
gatttgtatacatttttaactgaacaagatgcttatgatcaatattgtgtagctgctgaa
ggcccacagaatggagtgcaagtgcaattttggcaaaacacgttacccgaaccaacaatc
ttggaaactagagaacgattcaccgatacgtttgtaaaatggtcacctcttggcacgtac
attgtgactttccacaaacagggtgttgccatttggggtggttcaacgtttacacgaatc
aataaatttccccaagctggtacacaatttgttgatttttcgccttgcgaaaaatacttg
gtaacatatggtccaacggcaactggccaaaagattattatttgggatattcgtaccggt
caagaaaagcgttcatttgtttctgagggaagtgccagcaatatgtcaatgttccgctgg
tctcatgatgaccgttatgtggctcgtatgggcgatgaagccattcatatttatgaaacg
cctagtttttatttactggatatgaaatcgattaaaatcccgaaattgcgaaatttcagc
tggtcaccaacggataacatcattgcatactgggtggcagaacaaacagatgttccagcc
aaagtgacactgatgaaaataccgagacttgaggaaatccgtaataaaaatttattcaat
gtagctgattgcaaaattcattggcaaaagagtggtgactatttgtgtgtaaaggtcgat
cgtttttcaaaatcaagaaaggacaaaaaagattccgatgtcaaatttttgggcatgttc
tacaactttgaaatattccatatgcgcgaaaaggatattccagtcgattcagttgaaatc
aaggagatgattttggcattcgcatgggaaccaattggtaccaagttctccatcattcat
ggcgaatcaagcagtgccaacgttagtttctatgaagtaaaaaaaggccaaaaaataagt
ttggttaaaaaattggacaaaaaacaatgcagtcatctattttggtctccacgcggttca
ttcattgtattagctaatttaacgatgggcacctttgaattcgttgacaccaataatgat
ttcattgttatgaattcctgcgatcattttcgtgcttcggacgttgaatgggatccaact
ggaaggtattgtgtaactggcgtcagcgcatggaaggttaaggaagataacggctataat
atgtggtcattccaaggaaaaatcatgaaacgcgtaatgctgaaaaactttgttcaatat
ttatggcgaccacgaccaccaacgctgcttaccgaacagcagcaaaaggaaatcaaaaag
aacctcaaaaagtactatccacaatttgagcaaaaggatcgcttacgcatgacacgtgca
tcaaaagagttgctcgagaaacgagccacattgcgtgaacaattcatggaatatcgtaac
aaacggattgaagaatggaaagagcaaaaacaatccagaatggcattacgtagccatttg
gacacagatgaattaaatcgtgacgaacttgaagaagaaattgttgaagttttgattaaa
gaagagacaactatcatcgaataa
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