Cedecea neteri SSMD04: JT31_00990
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Entry
JT31_00990 CDS
T03298
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
cnt
Cedecea neteri SSMD04
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnt02000
]
JT31_00990
Transporters [BR:
cnt02000
]
Other transporters
Pores ion channels [TC:
1
]
JT31_00990
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AIR03251
UniProt:
A0A089PWE8
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All DBs
Position
complement(225229..227370)
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AA seq
713 aa
AA seq
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MTRISFGSTFVRQALLNSKLLIISTFIVGAPAFAADKPKEDTLTVVANANPDGSSTSYTQ
DDSAIASRSKTPRSEIPQSVSVVTPQVIDDYAVTSVNDAMKFVSGVAQSNTLGGIEDGFV
KRGFGSNSDGSVFIDGVRSNQGLAMDSSIDHVEVLKGSASLLYGILNPGGVINLVSKKPQ
YTWNTHVSGTSSSNGGGSGMVDVTGPLGNGFAFRLVAERQHEDYWRNFGTDEHTLIAPSL
SWYGDKASFNISYVEYKFDIPYDRGTAFINGKPLNIPYDRRIDDYANHAWGKNKRLTTNY
SYKLDDTWETNLNYAWMQRRYDSNEVRATAVDPNSGIVSRRADANRGFNHQTDYASWDIN
GSPELLGMTHDITLGADYEQNETYKKYSYRGKVSKTFNMNNPVYGEAPVTNSSTYSDANS
NLRTNLYSRSVFAKDSIHLTDQWIAVLGGRLQRYTQTSSSGWVKPQTTLEDRGDAFLPQM
GLVYKIIPDVSLYGSYSKSFTPSTQTDDNGNVASTEKGTTWEVGAKWQMSPRLTSSLALY
RIDEKDMSVFINGVTRNIPKARSTGAELELNGEIAEDWNLTANYSYDKTEIVEDDINPVN
VGNRLVNAPTTMGGLYLSHTLRFSWLPGELRLGGGGRYVGSRAGDPENSFTMPAYTVADA
FIAWDSKLVGKNTELKLNVKNLFDREYYESSAGNLRVIEGEPRTVYLSASVDF
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcatttcatttggttctactttcgttcgccaggcgcttcttaattcaaaatta
ttaatcatttcaaccttcatcgtgggggccccggcttttgcggccgataagcccaaagaa
gacacgctgacggtcgtggccaacgctaacccggacggctcgtcaaccagctatacccag
gatgactctgccatcgcctcgcgcagcaaaacgccgcgcagcgaaattccgcagtccgtt
agcgttgtcacacctcaggtgattgacgattacgcggtcacttcggtcaacgacgcgatg
aagttcgtcagcggcgtcgcgcagagtaataccctcggcggcatcgaggacggctttgtc
aaacgcgggtttggttcgaacagcgacggctcggtgtttatcgacggcgtgcgcagcaac
cagggcctggcgatggactccagcatcgatcatgttgaagtgttgaaaggctcggcctcc
ctgctctacggcatcctgaaccccggcggcgtaattaacctcgtcagcaagaaaccacag
tacacctggaacacccacgtcagcggcacaagcagcagtaacggcggcggttccggcatg
gtcgacgtgaccggcccgctcggcaacggtttcgccttccgcctggtggctgaacgccag
cacgaagactactggcgcaacttcggcaccgatgaacacacgttgattgccccgtccctg
agctggtatggcgataaagcctccttcaacatcagctacgtggaatataagttcgacatt
ccttatgaccgcggcacggcgtttatcaacggtaaaccgctgaacatcccttacgatcgc
cgcatcgacgattacgccaaccacgcctggggcaagaacaaacgcctgacgaccaattac
tcgtacaagctggatgacacctgggaaaccaatctgaactacgcctggatgcagcgccgc
tacgacagcaacgaagtgcgcgccacggcggtcgatccaaacagcggtatcgtctcccgc
cgcgcggacgccaaccgcggctttaaccatcagaccgattacgcgtcatgggatattaac
ggcagtccggaactgctggggatgacccacgacatcacgctgggcgcggactacgagcaa
aacgaaacctacaaaaagtattcgtaccgtgggaaggtgtcaaaaaccttcaatatgaat
aacccggtgtacggcgaagcgccggtaaccaacagcagcacctacagcgacgccaacagt
aacctgcgcactaatctctacagccgctccgtgtttgcgaaagacagcattcatctgacc
gaccagtggatagccgtgctgggtggccgcctgcagcgctacactcaaacttccagctcg
ggctgggtaaagccgcaaaccacgcttgaagacagaggcgatgcctttctgccgcagatg
ggcctggtgtacaaaatcattccggacgtttcgctgtacggcagctacagcaaatcattt
acgccctcgacacagaccgacgataacggcaacgtcgcctccaccgaaaaaggcaccacc
tgggaagtgggcgcgaaatggcaaatgtcaccacgccttaccagcagcctggcgctctac
cgcattgatgaaaaagacatgtcggtgtttatcaatggcgttacgcgcaacatcccgaaa
gcgcgctctaccggcgcagaattagagctcaacggcgaaattgccgaggactggaacctg
acggcgaactacagctacgacaaaaccgagatcgtcgaagacgatattaacccggtaaac
gtcggcaaccgtctggtgaacgccccgacgaccatgggcggcctctacctcagccatacc
ctgcgtttctcctggctgccgggtgaattacgcctgggcggcggcggacgctatgttggc
agccgtgcgggtgacccggaaaacagcttcaccatgccggcttacaccgtggcggatgcg
ttcattgcctgggacagcaagctggttggcaaaaacaccgagctgaagctgaacgtcaaa
aacctgtttgaccgcgagtactatgagtccagcgccggtaacctgcgcgttatcgaaggc
gagcctcgcaccgtttacctctccgccagcgtggatttctga
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