Cedecea neteri SSMD04: JT31_02625
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Entry
JT31_02625 CDS
T03298
Symbol
hmsH
Name
(GenBank) biofilm formation protein HmsH
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
cnt
Cedecea neteri SSMD04
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_14
TPR_2
TPR_19
Motif
Other DBs
NCBI-ProteinID:
AIR03547
UniProt:
A0A089PT77
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All DBs
Position
complement(580130..582571)
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AA seq
813 aa
AA seq
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MGQRRSINKLFFYRGVKLSLFLVIPGFFSVQGMGATSSYDRQVLQARGGDYRPLLDALKH
EEQVRMLNPEQVADWLQVASWAGLDDEVVSVWQRYQRRMSIPARGLAATAQSLRNLKRWT
ESLSLWEEALRLSPGNDDYRMGQIKTLADGQQRWQAREEALRLVEEKPDLAHLQTLSYVY
LRQGMTWDLLLSDTRALALAPGDKTALQNLIASLTVNRVNTAALALANEAELPASDRRNL
EVNAAAEMVRIAEIPPGEEKARFTVAQRALDRYHALLTKWRSDPQAQQDISRARIDRLGA
LYAHNYYPKVIQEYEALASENVRVPPWALRWLIASYLAEKQVESAQALTPQLFSGAANEN
EQAMFYALLDSGQYDAAGRYLQNLTQVTPYRRYVSGFPAPQPNDRWLEAQTLAVQYLLAT
DALPEAQALSQRLARTAPGNQGLSIDYARVLQARGLPLAAERELKKAEVLEPSNLELERQ
QAYVAQDLHEWRQMDLLTDDVMLRDPLEIGSQRLNRSRDVHRMSELRINGQQGIHSDTPV
SGAHDFNWDMAVYGPPVADSWRLFGGHRFNSGRFEEGKGSSRSVFGGIEWRPRNSWVELE
LANNNFNGGNKPGGRVSAWHSFSDGWRVGGEVERLARATPLRALRNGVSANQANLWLRWH
QSERREYQLATATSWFSDHNHRQEYTLQGKERLWQTARIALDLQPGVAYSTNSQTDTVYY
SPKWDLSAAPTLVANHVMYQRYDTVWSQQISAGAGIYRQKNYGAGAMTSLGYGQRIQWNN
VLDTGAMLNWEKRPWDGKRETHLAVAFDANLRF
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgggacaacggcggagtatcaataagttattcttttatcgtggcgtgaagctatcgcta
tttttagtcataccaggttttttttcggtgcaaggaatgggggcaacatcgtcatatgac
aggcaggtattacaggctcgcggcggagattatcgccctctgctggacgcgcttaagcat
gaggagcaggtcaggatgcttaacccggagcaggtggcagactggcttcaggtcgcctcc
tgggcaggacttgatgatgaggtcgtcagcgtctggcagcgttatcagcggcgaatgtcc
atcccggctcgcggcctggccgctaccgcgcaatctctgcgtaatttaaagcgctggacg
gagtcactttctctctgggaagaagcgctcaggctttcacccggcaatgatgattaccgc
atggggcaaattaaaacgctggccgacggccaacagcgctggcaggcgagggaagaggcg
ctgcgtctggtcgaggaaaagcccgacctcgcacatttacagacgctctcttatgtctat
ctgcggcaagggatgacctgggacctgttgctaagcgacacgcgagccctggcacttgcg
ccaggggataaaaccgcgctgcaaaacctgatagccagcctgaccgtgaacagggtgaat
actgcggcgctggcgttagccaacgaagcggaacttccggcatccgaccgcagaaatctg
gaggtgaatgcggcggccgaaatggtgcgtatcgctgaaattcctccgggggaggaaaaa
gcgcgctttaccgtcgcgcagcgggcgttggatcgctaccacgccttactcaccaaatgg
cgcagcgatccgcaggctcagcaggacatctcgcgggcgcgaatagacaggcttggcgcg
ctctacgcccacaattattacccaaaggtcattcaggaatatgaagccctggcctcagaa
aacgtgcgggttccgccctgggctttacgctggttgattgcttcttacctggcagaaaaa
caggtagaaagcgcgcaggcgctaacgccgcagctgttcagcggcgcggcgaatgagaac
gagcaggcgatgttttatgccttgctggacagcggccagtacgacgccgccggtcgatat
ttgcaaaacctgactcaggtaacgccctatcgtcgctatgtgtcgggcttcccggcaccc
cagccgaatgaccgctggttggaggcgcaaacgctcgctgttcaatatcttttagccact
gacgcgctgccagaagcacaggcgctgtctcaacgtctggccagaaccgcgccggggaat
cagggattaagtatcgattatgccagggttttgcaggcgcgtgggttgccgctggccgcc
gagcgagagctaaaaaaagcggaagtgctcgagccgtccaaccttgagcttgagcggcag
caggcttatgtcgcgcaggatcttcacgagtggcggcaaatggatttgttgaccgacgat
gtgatgctgcgcgacccgctggagatcggttctcagcggctgaaccgctcgcgggatgtt
caccggatgtccgaactgcgcattaacggccagcaggggatccactctgatacgcccgtc
agcggggcgcacgattttaactgggatatggccgtctatggcccacccgtggccgacagc
tggcggctgtttggtggccaccgttttaacagcgggcgctttgaagaaggcaagggatcc
agccgcagcgtgtttgggggaatcgagtggcggccgcgcaatagctgggtcgagcttgaa
ctggcgaacaacaacttcaacggcggcaataagccgggcggccgcgtctcggcctggcac
agcttcagcgacggctggcgcgtggggggcgaggttgaacgtcttgcacgggcaactccg
ctgcgggctttgcgcaacggggtaagcgccaatcaggccaacctgtggctgcgctggcat
caaagcgaacggcgtgaatatcagctggcgaccgcgaccagctggttctcagaccataac
caccgccaggaatacaccttgcagggcaaagagcggctgtggcagacggcgcggatcgcg
ctcgacctgcagcccggcgtggcttacagcaccaacagccagaccgacacggtgtattac
agcccgaaatgggacttatctgccgcgcccacgctcgtcgctaaccacgtgatgtatcag
cgctatgacaccgtctggagccagcagattagcgccggggcgggtatttaccggcaaaaa
aactatggagcaggggcgatgacgtcgctgggatatggccagcgtatccagtggaacaac
gtcctcgacaccggggccatgctgaactgggaaaagcggccctgggacggcaagcgggaa
actcatctcgccgtcgcttttgatgcgaatttacgattttaa
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