Cedecea neteri SSMD04: JT31_02815
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Entry
JT31_02815 CDS
T03298
Name
(GenBank) hypothetical protein
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
cnt
Cedecea neteri SSMD04
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnt03000
]
JT31_02815
Transcription factors [BR:
cnt03000
]
Prokaryotic type
Helix-turn-helix
Other families
JT31_02815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
HisZ_C
HTH_Crp_2
LacI
TetR_N
MarR
HTH_31
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AIR03580
UniProt:
A0A089RAH3
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All DBs
Position
complement(624707..625459)
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AA seq
250 aa
AA seq
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MGRDTDGDIISRIRQKLAEFSQQESRVAQAILHDPGFASSATIDQLAQAAGVSPATITRF
ARAAGCDDIRDLRMKLAQASTAMPGSELSAAWQQRLGSIQQSLSQQLETLPEASVTRAVA
LLRRANAIHIFSAGAADTPFASLLQYRLLTLGQPASVCYDPALMSFTASMLNAGQAMIVF
ASSTPDSALLAAVQQARRQGAAIIMVTKDPTSAAQAGDVWLSPGEGQYGALLIIDLLCDG
VAAAGDERQI
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atcgggcgggatacggacggcgatattatcagccgcattcggcagaagctggcggagttc
agccagcaggagtccagggtagcgcaggctattctgcacgatccgggttttgcctcctcg
gccaccattgaccagttggcgcaggcggcgggcgtgagtccggcgacgatcacccgtttt
gcccgagccgccggctgcgatgatattcgtgatttacgcatgaagctggcgcaggccagt
accgccatgccgggcagcgagctgtctgctgcctggcagcagcgtttgggcagcatccag
cagtcgctgagtcagcagctggaaacgttgcctgaggcgagcgtcacccgtgccgtggcg
ctgctcaggcgagccaatgcgattcatatttttagcgccggtgcggcggacacgcctttt
gccagcctgctgcagtatcgcttactgacgctggggcagcccgccagcgtctgctatgac
ccggcgctgatgagcttcaccgcctcgatgctgaatgcggggcaggcgatgattgtcttc
gccagctcaacgccggacagcgcgctgcttgcggcggtgcagcaggccaggcggcagggc
gcggcgataatcatggtgaccaaagatcccaccagcgcggcgcaggccggagacgtctgg
ctttctcccggagaggggcaatatggtgcgttattgattatcgacctgctgtgcgatggc
gtcgccgccgcaggagatgagcggcagatctga
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integrated database retrieval system