Cedecea neteri SSMD04: JT31_06245
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Entry
JT31_06245 CDS
T03298
Name
(GenBank) endonuclease VIII
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
cnt
Cedecea neteri SSMD04
Pathway
cnt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JT31_06245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnt03400
]
JT31_06245
Enzymes [BR:
cnt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JT31_06245
DNA repair and recombination proteins [BR:
cnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JT31_06245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AIR04230
UniProt:
A0A089RCD1
LinkDB
All DBs
Position
complement(1343998..1344789)
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AA seq
263 aa
AA seq
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MPEGPEIRRAADKLEAAVGGEPLTEAWFAFEELKPFEAMLKGKTIERIETRGKAMLTHFS
NGLTLYSHNQLYGVWRVVEADKQPETKRVLRVKLQTAEKAILLYSASDIEMLEQKQLEQH
PFLQRVGPDVLDETLTVGQVKERLLSPKFRRRQFSGLLLDQAFLAGLGNYLRVEILWEAE
LAPQHRAEDLSEEQVERFAGALLAVPRLSYQTRGQVDENKHHGAIFSFRVFHRAGEPCER
CGEIIEKTMLSSRPFYWCPVCQK
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaggaccggaaatccgccgcgcggcggacaaacttgaagccgccgtgggcggc
gagccgttaaccgaagcctggtttgcttttgaagagctaaagccgttcgaggctatgctc
aagggcaagactatcgagcggattgaaacccgcggcaaggcaatgctgacccatttttct
aatggcttaacgttgtacagtcataaccaactatacggcgtctggcgggtggttgaggct
gataaacagccagaaacgaagcgagttttaagggttaagctacaaacggccgaaaaagcc
attttgctgtacagtgcctcagacattgaaatgctggagcagaaacagcttgagcagcat
cctttcctgcagcgtgtagggccagatgtgctggacgagacgctgacggtggggcaggtc
aaagagcgtttgttatcgccgaagtttcgccgcaggcagttcagcggcctgctgttagat
caggcgtttttggccgggctgggcaactatcttcgggtggagatcctttgggaggcagag
cttgcgcctcagcaccgcgctgaggatttaagcgaagagcaggttgagcgtttcgccggg
gctttgctggctgtgcctcgtctttcttatcagacgcgagggcaggtggatgaaaataaa
catcacggcgcaatctttagtttcagggtgtttcatcgggccggtgaaccgtgcgagcgc
tgcggagagataattgaaaaaacgatgctctcttcgaggccgttttactggtgccccgtc
tgtcagaaataa
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