Cedecea neteri SSMD04: JT31_06265
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Entry
JT31_06265 CDS
T03298
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cnt
Cedecea neteri SSMD04
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnt03400
]
JT31_06265
Enzymes [BR:
cnt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JT31_06265
DNA repair and recombination proteins [BR:
cnt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JT31_06265
Prokaryotic type
JT31_06265
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AIR04234
UniProt:
A0A089Q124
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All DBs
Position
complement(1347163..1348572)
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AA seq
469 aa
AA seq
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MTTHLVWFRNDLRVHDNYALHAACRNPDAKVIGVFVVTPEQWRQHVMAPKQAEFIFQHVQ
ALGHALAGRGIELHIRQVADFTASVAYIKAFCTEQNVDALFYNYQYEVNERARDAALEKA
LDVDVTVQGFDDSLLLAPGSVTTGNHEMYKVFTPFSKAFIRRLQEGLPECVPAPKTRGEV
PFNEQFAFDVPLEKFDHEIFPVGEQEAIGMLRKFCQQPAADYPEQRDFPAIEGTSRLSPY
LATGVLSPRQCLHRLLKEQPKALEGEAGATWLNELIWREFYRHLMVAYPKLCRHRPFIAW
TDKVRWRGDDALLEAWQQGKTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLVKDLLIDWR
QGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDADGDFIRQWLP
ELKAVPGKQIHSPWAWADKQKQTLDYPRPIVDHKQARLNTLAAYEAARK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatctggtctggtttcgcaacgatcttcgtgttcacgataactacgcctta
cacgccgcctgccgcaaccccgatgcaaaagtcatcggggtatttgttgttacgcccgag
cagtggcgtcagcatgtgatggccccgaagcaggctgaattcatctttcagcatgtgcag
gcattgggccatgcgcttgccgggcgtgggattgaacttcatatcaggcaggtcgcggat
ttcaccgcatcggttgcttacataaaagcgttttgcactgagcaaaacgttgatgcgctt
ttttacaactaccagtatgaagtcaacgagcgtgcccgtgatgccgccttagaaaaagcg
cttgatgtcgacgtgaccgtgcaaggttttgatgacagcctgctgctggcgccgggcagc
gttacgaccggtaaccacgagatgtataaagtgtttactcctttcagtaaggcgtttatt
cggcgtttgcaggaaggactaccggagtgcgtaccggcgccgaaaactcggggagaggtt
ccattcaacgaacagtttgcgttcgatgtgccgcttgaaaaatttgaccacgagattttc
cctgtaggtgagcaggaggcgatcggtatgctacgtaagttttgccagcagccggctgct
gactacccggagcagcgagatttccctgctatagaagggaccagccgcctgtcgccttat
ctggcaaccggcgttttgtctccacgccagtgcctgcatcgcctgttaaaagagcagcct
aaagcgctggagggtgaagccggagcgacctggctcaacgaacttatctggcgcgaattt
taccgccatctgatggtcgcttacccgaagctttgccgtcatcgcccgtttatcgcctgg
accgataaggttcgctggcgcggggatgatgcgctgcttgaagcctggcagcagggtaaa
accggctacccgattgtcgatgcggcgatgcgccagctcaaccaaacgggctggatgcat
aaccgcttacgcatggttgtggcgagtttcctggtaaaggatttgctgatcgactggcgg
cagggcgagcgctactttatgtctcagctgattgacggcgacctggcggctaacaacggc
ggctggcagtgggctgcttccaccggtaccgacgccgcgccctattttcgtatttttaac
cccacaacccagggcgaacgcttcgacgcggacggcgactttatccgccagtggctgccg
gagctgaaagcggttcccggcaagcaaatccattccccatgggcctgggctgataaacaa
aagcaaacgctggactacccgcgcccgattgttgaccataagcaggcccgactgaatacg
cttgcggcctacgaggcagcaagaaaataa
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