Cedecea neteri SSMD04: JT31_07655
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Entry
JT31_07655 CDS
T03298
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cnt
Cedecea neteri SSMD04
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnt03400
]
JT31_07655
DNA repair and recombination proteins [BR:
cnt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JT31_07655
Archaeal homologous recombinant proteins
JT31_07655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AIR04488
UniProt:
A0A089PWS3
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All DBs
Position
1624940..1626157
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AA seq
405 aa
AA seq
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MRILHTSDWHLGQNFYTKSRASEHQAFLDWLINAALEHQVEAIIVAGDIFDTGSPPSYAR
EMYNRFVVQLQATGCQLVVLAGNHDSVATLNESRELLACLNTRVIASARHNKDEQALVLN
QKDGTPGAILCPIPFLRPRDIQSSQAGLSGHEKQRSLMEAISEHYQHCYEAAVALRGDRP
LPIIATGHLTTVGVTKSDAVRDIYIGTLDAFPAQHFPPADYIALGHIHRAQKIGGSEHIR
YSGSPIPLSFDETGKAKSVFLVEFSGAALASVEPLEVPISQPLAIVKGSLREIEQQLEQW
RNAPAEPKVWLDIEIATDEYLHDMQRQVQALTDELPVEVVLLRRSREQRERVIASQHKET
LSELSVEEVFERRLSQEETSDERAARLRTLFAQTLSDLHQQEEQA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctccacacttcagactggcacctcggccaaaacttctataccaaaagccgg
gcttctgaacaccaggcctttctcgactggttgataaacgccgcgctcgaacatcaggtg
gaggcgattattgtcgcgggggatatctttgataccggctcaccgccgagctacgcccgc
gaaatgtataaccgctttgtggtgcagctgcaggccaccggctgccagctcgtggtgctg
gcgggtaaccacgattccgttgccacgctcaacgaatcccgcgagctgctggcctgtctg
aatacccgagtgattgccagcgcacgccacaacaaagacgagcaggcgctggtccttaat
caaaaagacggcacgccaggcgctatcctttgccccattcctttcctgcgcccccgcgac
attcaaagcagccaggccggactgtctggccatgagaaacagcgttctttaatggaagcc
atcagcgaacattatcagcactgctatgaggccgccgttgccctgcgcggagacaggccg
ctgccgattatcgccaccgggcacctgactaccgttggcgtaacaaaatctgacgcggtt
cgcgacatttatatcggcacgttggacgctttcccggcgcagcacttcccgccagccgac
tacatcgcgctcgggcatattcatcgcgcgcagaaaatcggcggcagcgagcatattcgc
tacagcggttcgcctattccgctgagtttcgacgaaaccggcaaagcaaaaagtgtgttt
ctcgtagagtttagcggtgcggcgctggcaagcgtcgaacctctggaggtacccatcagc
cagccgctggccatcgtcaaaggttcgctgcgtgaaattgagcagcagcttgagcagtgg
cgaaatgcgccggctgagccgaaagtctggctggatatcgaaatcgccaccgatgaatat
ctgcacgatatgcagcgccaggtccaggcgcttaccgacgaactgccggtcgaagtcgtc
ctgctgcgccgcagccgcgaacagcgcgagcgggtcattgccagccagcataaagagacg
ctgagcgagttaagcgttgaagaagtttttgagcgacggctgagccaggaagagaccagc
gacgagcgtgccgcacggttaagaacgctgtttgcacaaaccctttcagacttgcaccag
caggaggaacaggcatga
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