Cedecea neteri SSMD04: JT31_07660
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Entry
JT31_07660 CDS
T03298
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cnt
Cedecea neteri SSMD04
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnt03400
]
JT31_07660
DNA repair and recombination proteins [BR:
cnt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JT31_07660
Archaeal homologous recombinant proteins
JT31_07660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_ATPase
AAA_15
nSTAND_NTPase5
nSTAND3
ABC_tran
cobW
GTP_EFTU
AAA_21
MobB
RsgA_GTPase
NTPase_1
AAA_14
TsaE
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIR04489
UniProt:
A0A089Q1X2
LinkDB
All DBs
Position
1626154..1629309
Genome browser
AA seq
1051 aa
AA seq
DB search
MKILSLRLKNINSLKGEWKIDFTQEPFASNGLFAITGPTGAGKTTLLDAICLALYHKTPR
LSTVSQSQNDLMTRDTAECLAEVEFEVKGVGYRAFWSQNRARNAANGNLQAPRVELAQIS
DGKILADKIKDKLEIVASLTGLDYDRFTRSMMLSQGQFAAFLNADANDRASLLEELTGTE
IYGTVSAAVFENHKQIKSRLENLLAQASGVALLNEEQQQQLTQSLQALTFEEKKLSDEQQ
QQQQHQHWLSQRARLAADKEQKLQALNGASQALKDAEPMLAKLTRALPAEKLRPHWQRLQ
EKQQTLRQNGEAAEKVNTRLQQLTVRRQQTRLLAAGQAQKLQSEAQLVQEWLTANDRYRL
LAAELTGWRMAFTQQQRDERQLAELQQTLQASQQKLQALPEPTLSLSPDEVSAHLQRMLA
TRPARQQLAALQPQFATLEKRKAEQQRELAELDKLIAGRDAELSQKRQQYKDKRQHEADL
EKVVEQERRIQSLEAERALLQPDSPCPLCGSTQHPAVEAYKTLEPGENQQRLAALKQEVA
KLAELGFALKGQLDTQRQQREKLVQVSPALQEEEASLSARWQQQCAEAGIALTPQDDLTA
WLNEQEQREQQLRQLGERQALEVQFQRDSQQHEKLSADFMVQRTSLQATLERVGLVRPEP
GEEQNWLEARQKESLQWQQQQDKLPQLHQQLSSLEMLLSNLMDDGSTPPPLEANERQAAL
QNWQTLHNDCNLLEGQRQSLQEQLKQSEREATAAQEQFSNALSASQFSDEADFRSALLEE
AGRLELEQRKQQLERQQQQQTTLLEQAESALAQHLSGRPETLSEETEVSMLDERIAALTL
QLRENASRQGQITQQLRHDEENRVRQQALMQEIKACEAQAEDWGYLNSLIGSKEGDKFRK
FAQGLTLDNLVWLANNQLNRLHGRYLLQRKDNEALELQVVDTWQADAVRDTRTLSGGESF
LVSLALALALSDLVSHKTRIDSLFLDEGFGTLDAQTLDTALDALDTLNASGKTIGVISHV
EAMKERIPVQIKVKKINGLGVSRLDKVFAVD
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttaagcctgcggttaaaaaacataaactccctgaaaggcgaatggaaaatt
gatttcacccaggagcccttcgccagcaacggactgttcgctatcaccggcccgacgggc
gcgggcaaaaccaccctgctcgacgcaatttgcctggcgctgtaccacaaaacgccgcgc
ctcagcaccgtttctcagtcgcaaaacgacctgatgaccagggacaccgctgagtgcctg
gccgaagtggagttcgaggtcaaaggcgttggctaccgggctttctggagccagaaccgc
gcccgtaacgcggcaaatggcaaccttcaggcgccgcgcgtggagctggcccaaatcagc
gacggcaaaatcctcgcggataaaattaaagacaagcttgagattgtcgcctcgcttacc
gggctggactacgaccgcttcacccgctcgatgatgctctcccaggggcagttcgccgcc
tttttaaacgccgacgccaacgaccgcgcctcgctgcttgaggagctgaccggcaccgaa
atctacggcaccgtgtctgcggcggtctttgaaaatcataagcaaatcaaaagccggctt
gaaaacctgctggcccaggcttcaggcgttgcgctattgaatgaggagcagcaacagcag
cttacgcagagtttgcaggcgcttacttttgaagaaaaaaagctgtcggacgaacagcag
caacaacagcaacatcagcactggctcagccagcgtgcccggctcgccgccgacaaagag
cagaagctgcaggcgctgaacggtgccagtcaggcccttaaagacgcggagccgatgctg
gcgaagctgacccgcgccctgcctgccgaaaaactgcggcctcactggcagcggttgcag
gaaaagcagcagacgttaaggcaaaacggcgaagccgcagagaaagtgaatacccgctta
cagcagctcaccgttcgtcgtcagcaaacccgcctgttagccgccgggcaggctcaaaag
cttcagtcagaagcacagctggtacaggaatggctcaccgccaatgaccgctatcgcctg
ttagccgccgagctgacgggctggcgcatggcgtttacgcagcagcagcgtgatgaaaga
cagctggctgagctccagcagacgctgcaggccagccagcaaaagctgcaggcgctgccg
gagccgacgcttagcctttctcctgatgaagtgagcgctcatttacagcgaatgctggca
acccggcctgctcgccagcagttggccgccctgcagccacagttcgccacgctggagaaa
cgtaaagccgagcagcagcgggagcttgccgagctggataaactgattgccgggcgtgac
gctgagctcagccaaaaacgtcagcaatacaaagacaaacgccagcatgaggccgatctg
gaaaaagtcgtcgagcaggaaaggcgcattcaaagccttgaagctgagcgtgcgctttta
caaccggattccccgtgcccgctttgcggctcaacccaacatcccgccgtagaagcctat
aaaacgctggagccgggcgagaaccagcagcgtcttgccgcccttaagcaagaggtcgcc
aaactcgcggagcttggcttcgccctgaaaggtcagcttgatacccaacgccaacagcgc
gaaaaactggtgcaggtaagccccgcgctgcaggaagaggaagcctctctgtccgcccgc
tggcagcagcagtgtgcagaagcaggtatcgctttaacgccgcaggacgatctcaccgcc
tggcttaacgagcaggaacagcgtgaacagcagctgcgccagctaggcgagcgtcaggcg
ctggaggtgcagtttcaacgcgacagccagcagcatgaaaagctgagtgccgactttatg
gtacagcgcacgtctctacaggcaacgctggagcgggtcggtcttgtgcgccccgagccg
ggagaagagcaaaactggctcgaagctcgtcaaaaagaatccctgcaatggcagcaacag
caggacaagctgccgcagcttcaccagcagctttccagccttgagatgctgctctccaat
ctaatggacgacggctcaacgccgccgccgttggaggcaaacgagcgccaggctgcgctg
caaaactggcagacgctgcataacgactgcaacctgctcgaaggacagcgtcagtccctg
caagaacagctgaagcaaagtgaaagagaagccacggcggcacaggagcagttcagcaat
gcgctctcggccagccagttcagcgacgaagccgacttccgaagcgcgctgctggaagag
gccgggcgacttgagcttgagcaacgtaagcagcagctggaacgccaacagcagcaacag
actacgctgctggaacaggctgaaagcgcgctggctcagcatctctcagggcggccagaa
accctgagcgaagagaccgaagtcagcatgctggatgaacgtatcgcagcgcttactctc
cagctgcgcgaaaacgcctctcgccaggggcaaatcacccagcaactgcgtcatgacgag
gaaaatcgggttcgccagcaggcgctgatgcaggagatcaaagcgtgtgaggcgcaggcg
gaagactggggctacctcaattcgctcatcggctccaaagaaggggataaattccgtaaa
ttcgcccaggggctgacgctggataatctggtctggctggcaaacaatcagcttaaccgc
ctgcacgggcgctacctgcttcagcgcaaagacaacgaagcgctcgagctgcaggtggtg
gatacctggcaggcagatgcggtgcgggatacacgcacgctctccggcggagaaagtttc
ctggtgagtctggcgctggcgctcgcgttatccgatttggttagccataaaacccgcatt
gactccctgtttctggatgaaggttttggcaccctcgatgcgcagacgctggataccgcg
ctcgacgcgctggatacgctgaacgccagcggcaaaactatcggcgtcatcagccacgtt
gaggcgatgaaagagcggatcccggtgcaaattaaggtgaagaagatcaacggcctgggc
gtgagccgactggataaagtttttgcagtggattga
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