Cedecea neteri SSMD04: JT31_08380
Help
Entry
JT31_08380 CDS
T03298
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cnt
Cedecea neteri SSMD04
Pathway
cnt03030
DNA replication
cnt03430
Mismatch repair
cnt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JT31_08380 (dnaE)
03430 Mismatch repair
JT31_08380 (dnaE)
03440 Homologous recombination
JT31_08380 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnt03032
]
JT31_08380 (dnaE)
03400 DNA repair and recombination proteins [BR:
cnt03400
]
JT31_08380 (dnaE)
Enzymes [BR:
cnt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JT31_08380 (dnaE)
DNA replication proteins [BR:
cnt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JT31_08380 (dnaE)
DNA repair and recombination proteins [BR:
cnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JT31_08380 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIR04622
UniProt:
A0A089PW91
LinkDB
All DBs
Position
complement(1777529..1781011)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGSGHGA
GIKPIIGADFNVANELLGDELSHLTVLAANNEGYQNLTLLISRAYQRGYGAAGPIIDREW
LVELNEGLILLSGGRMGDIGKSLLRGNQPLVDQCLEFWQQHFADRFYLELIRTGRVDEEN
YLHAAVALADERGLPVVATNDVRFIDAGDFDAHEIRVAIHDGFTLDDPKRPRNYSAQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGEMTTEDFLVMKSKEGL
EERLEFLFPDPDERAQKRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVSE
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDDQGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRRAKQGLEPIDIAAIPLEDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDVEWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGAINNGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLSPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQGGHFLDLFDLCARSDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
ALGDALKAADQHAKAEAIGQADMFGVLAEEPEQVEKSYASVTPWPDHVVLEGERETLGLY
LTGHPINQYLKEIERYVGGMRLKEMHPTERGKMTTAAGLVIASRVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALEKYQHLLEKDRILIVSGQVSFDDFSGGLKMTARELMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRVDARARLRFGATWRVSPSD
RLLNDLRTLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcattcaccttcgggtgcacagcgactattccatgattgatggg
ctggctaaaaccgggccgctggtaaaaaaagccgcggcgctgggcatgcctgctctcgct
atcaccgattttaccaacctctgcgggctggtgaaattctacggttccggccatggtgcc
ggcattaagcctatcatcggcgcagacttcaacgtggctaacgagctgttgggtgacgaa
ctgagtcatttgacggtgctggccgcgaacaacgaaggttaccaaaatcttaccttactg
atttctcgtgcctatcagcgtggctacggcgccgcgggcccaataattgaccgtgaatgg
ctggttgagctaaatgaaggtctgatcctgctgtccggcgggcgcatgggagatattggt
aaaagcctgcttcgtgggaatcagccgctggtcgatcagtgtctggaattctggcagcag
cattttgccgatcgcttctatctggaattgattcgtaccggtcgagtggacgaagagaac
tatctccacgccgccgtagcgctggctgacgaacgcggcctgccggtggtggcaaccaat
gacgtccgttttatcgacgctggcgactttgacgcgcatgaaatccgcgtagctatccac
gacggcttcacgctggacgatcctaagcgcccgcgcaattactccgctcagcaatatatg
cgtagcgaagaagagatgtgcgagctgttctcggatattccggaagcgctggaaaacagc
gtcgaaatcgcaaaacgctgcaacgttaccgtgcgccttggcgaatacttcctgccgcag
ttccctaccggtgaaatgaccaccgaagatttcctggtcatgaaatccaaagaagggctg
gaggagcgtcttgagttcctgttcccggatcctgacgagcgagcacaaaaacgccctgaa
tacgacgagcgtctggacatcgagctgcaggttattaaccagatggggttccccggctac
ttcctgatcgtgatggaatttatccagtggtccaaggataacggcgtgcctgtgggaccg
gggcgtggttccggtgcggggtcgctggtggcctatgcgctgaaaatcaccgatctcgat
ccgcttgaatttgacctgctgttcgaacgtttccttaacccggaacgtgtttcgatgccg
gacttcgacgtcgatttctgcatggaaaaacgtgaccaggttatcgaccacgtatcggaa
atgtatggccgtgaagccgtttcgcagatcattaccttcggtacgatggcggcgaaagcg
gttattcgtgacgtaggccgcgtgctcggccacccatacggctttgtcgatcgtatctcc
aagctggttccacccgatcccggtatgacgttggcgaaagccttcgaggccgagcctcaa
ctgccggagatctacgaagctgacgaagaggttaaagcgctgatcgacatggcgcgcaag
ctggaaggcgttacgcgtaatgccgggaagcacgccggtggcgtggttattgcgccgacc
aaaattactgattttgcgccgctttattgtgacgatcaggggcagcaccctgttacccag
tttgataaaaacgacgttgaatatgccggcctggtgaagtttgacttcctggggctgcgt
acgctgacgatcatcgactgggcgctgaaaatgatcaacccgcgtcgggcaaaacagggg
ctggagccgattgatatcgccgccatcccgctcgaggacaagaaaagcttcgacatgctg
cagcgctcggaaaccactgcggtcttccagcttgaatcgcgcggcatgaaggacctgatt
aagcgtctgcagcctgactgcttcgaagatatgattgccctcgtggccctgttccgcccg
ggcccgctgcagtcagggatggtagataacttcatcgaccgtaagcacgggcgcgaagcg
atttcttatccggacgtggaatggcagcacgaaagcctgaaaccggtactggagccaacc
tacggcatcatcctgtatcaggaacaggttatgcagattgcccaggtactttctggttat
acccttggcggcgcggacatgctgcgccgtgcgatgggtaaaaagaaaccggaagaaatg
gccaagcagcgcggcacctttgaagagggcgcgataaataacggcgtcgacggcgagctg
tcgatgaaaatctttgacctggtggagaaatttgccgggtacggctttaacaaatctcac
tccgccgcctatgctttggtttcttaccagacgctgtggctgaaggcgcactatccggca
gaatttatggcggccgtaatgaccgccgatatggataataccgagaaagtggttggcctg
gtggatgagtgctggcgcatggggctgaaagttctgtcgccggacattaactctggtctt
tatcatttccacgttaacgatgacggggaaattgtttacggtatcggcgcgatcaaaggc
gtgggcgaaggccctattgaagccattatcgaggcgcgaaatcagggcggacacttcctc
gatctctttgatttatgtgctcgctccgatatcaaaaagctgaatcgcagggtgctggaa
aaactcattatgtccggggcatttgaccggcttgggccgcaccgtgccgcactgatgaac
gctttaggtgatgcgctgaaagcggccgaccagcacgcgaaagcggaagccatcggccag
gcggatatgttcggcgtactggcagaagagccagagcaggtcgaaaaatcctacgccagc
gtgaccccatggccggatcatgtggtgctggaaggggagcgtgaaacgcttgggctgtat
cttaccggccacccgattaaccagtacctgaaagaaattgagcgctatgtcggtggcatg
cgcctgaaagagatgcacccgacagaacgtggtaaaatgaccacggctgcgggtctggtg
attgcttcgcgggtgatggtcaccaagcgaggtaatcgcatcggcatctgtacgctggat
gaccgctctggtcgtctggaagtgatgttattcacagatgcactagaaaaataccagcat
ctgctggaaaaagaccgtatcctgatcgtcagcggacaggtcagctttgatgacttcagc
ggagggcttaaaatgacggcccgcgagctgatggacatcgacgaagcccgtgaaaagtac
gcgcgtgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccgt
ctccgtcagtctctggaaccccatcgttcggggacaattccagtacatctctactatcag
agggtggatgcacgagcccggttgcgcttcggtgcgacatggcgtgtttcccctagcgat
cgtttacttaacgatttgcgaacgctgattggttcggagcaggtggaactggagtttgac
taa
DBGET
integrated database retrieval system
