Cedecea neteri SSMD04: JT31_09480
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Entry
JT31_09480 CDS
T03298
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
cnt
Cedecea neteri SSMD04
Pathway
cnt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JT31_09480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnt03400
]
JT31_09480
Enzymes [BR:
cnt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
JT31_09480
DNA repair and recombination proteins [BR:
cnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JT31_09480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIR04837
UniProt:
A0A089PWU6
LinkDB
All DBs
Position
complement(2026927..2027433)
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AA seq
168 aa
AA seq
DB search
MVSDILQPNLRVVFCGINPGKSSAHLGLPFAHPANRFWKVLHLAGFTDRQLKPEEAQLLL
SYGCGVTKLVERPTVQASEVALQELRAGGRELITKMQDYQPRTLAILGKQAFEQAFSQRG
AKWGKQEITIGDTEVWILPNPSGLSRVTLDKLTEAYKELDESLAARGR
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcgatatccttcagccgaacctccgggtcgtgttctgcggcataaatccggga
aaatcatccgctcacctcgggttaccttttgctcatcctgctaatcgtttctggaaggtt
cttcacctggcgggttttaccgatcggcagctcaagcctgaggaagcacaactgctgctt
tcctacggctgtggcgtgacgaagctggttgagcggcctacggttcaggcaagcgaagtg
gcgttgcaggagctgcgtgccggtggccgagagctgattacaaagatgcaggactaccag
ccgagaacgctggctattctgggcaagcaggcctttgagcaggctttcagccagcgtggt
gcgaaatggggcaagcaggagattaccatcggtgataccgaggtgtggattttgcctaac
ccgagcggcttaagccgcgtgacgttggataaactgacggaagcctataaagagctggat
gaatctctggcggctcgtgggcggtaa
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