Cedecea neteri SSMD04: JT31_10180
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Entry
JT31_10180 CDS
T03298
Name
(GenBank) mechanosensitive channel protein
KO
K22051
miniconductance mechanosensitive channel
Organism
cnt
Cedecea neteri SSMD04
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnt02000
]
JT31_10180
Transporters [BR:
cnt02000
]
Other transporters
Pores ion channels [TC:
1
]
JT31_10180
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
5-FTHF_cyc-lig
Motif
Other DBs
NCBI-ProteinID:
AIR04968
UniProt:
A0A089PY50
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All DBs
Position
2164615..2167953
Genome browser
AA seq
1112 aa
AA seq
DB search
MRLIITFLMAWCLSLGAYAATAPDAKQISQELEQAKAAKNTPNQAEIVEALQSALNALDE
RKASLERAEQYQQVIDNFPKLSQTLRKQLTNLRDEPEEVPPGMSSDALNQEILQVSSQLL
DKSRLAQQEQERTRDISDSLSQLPQQQTDTRRQLNDIERRAGSQQSGSTPLAQAQHFLLQ
AESARLKAQVDELELAQLSANNRQELARMRAELAQKQSTQLDAYLQALRNQLNSQRQREA
EQALESTELLAETSANLPPEIFEQFKNNRELSQALNQQAQRMDLVASQQRQANNQTLQVR
QALNTLREQSQWLGVSNVLGEALRAQVARLPDMPKPQQLDTELAQLRVERLHYEDLLNKH
AQLRQVRQADGSPLTAEQNKILQAQLRTQRELLNSLLQGGDTLILELTKLKVANSQLEDA
LKEVNEATHRYLFWTSDVSPIGISWPLEIVQDLRRLVSLDTFSQLGKAAIMMVTSKETLL
PLFGALILVGFSISSRRHFTAFLERSSAKVGKVTQDHFRLTLRTVFWSILVASPLPVLWA
TLGYGLQEAWPYPIAVAIGDGVTATVPLLWGVMICATFARPTGLFVVHFGWPRERVGRAM
RYYIMSIGLIVPLIMALIMFDNLNDREFSASLGRLCFIMICGALAIVTLSLKRAGLPLYL
DKQGDGDNIVNTILWNLLLCAPLMAILAAIVGYLMTAQALLARLETSVAIWFLLLVIYHI
IRRWMLIQRRRLAFDRAKHRRAEILAQRARGEEDTAHANSTEGSVETVDEPEVDLDTISA
QSLRLVRSILMLIALLSVIFLWSEIHSAFGFLGNITLWDVTSTVQGVESIEPITLGAVLI
AILVLIITTQLVRNLPALLELAILQHLNLTPGTGYAITTITKYLLLLIGGLVGFSMIGIE
WSKLQWLVAALSVGLGFGLQQIFANFVSGLIILFEKPIRIGDTVTIRDLTGTITRINTRA
TTISDWDRKEIIVPNQAFITEQFINWSLSDSVTRVVLTIPAPSEANTEEVTKVLLEAAHR
CTLVLDTPQPEAFLVDLQQGIQVFELRIHAAEMGHRMPLRHEIHQLILQGFREHNIEMPF
PPFQMRLESLSGQRSSKTIKSAGRAARTPGSL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgattatcactttcctgatggcctggtgcctcagcctgggggcgtatgcagca
acagcgcccgatgcaaaacaaatctcgcaggaactggagcaggctaaggccgccaaaaac
acgccaaaccaggcggaaattgtggaagctctccagtcggcgctgaacgcgttagatgaa
cgcaaagcctcgcttgaacgcgccgaacaataccagcaagtcattgataacttccctaag
ctgtcgcaaaccctgcgcaaacagctgaccaacctgcgcgatgaacctgaagaagtgccg
ccgggcatgagcagcgacgcgttaaaccaggagattttgcaggtcagcagccagctgctg
gacaaaagccgacttgcccagcaggagcaggaaagaacccgcgacatcagcgactcgcta
agccagctccctcaacagcaaacggatactcgtcggcagctcaacgacattgagcgtcgc
gcgggctctcagcaaagtggcagcacgcccctggcccaggcacagcacttcctgctgcag
gctgaatccgcccgactgaaggctcaggtggatgaactcgaactggctcagctttccgct
aacaaccgccaggagcttgcgcgcatgcgcgccgagctggcgcaaaagcagagtacgcag
ctggatgcctacctccaggctctgagaaaccagctcaacagccagcgccagcgtgaagcg
gaacaggcgctggaaagcaccgagctgctggcggaaaccagcgctaacctgccgccagaa
atattcgagcagttcaaaaataaccgcgaactctctcaggcactcaatcaacaggcccag
cgcatggacctggtggcctctcagcaacgtcaggccaataaccagacgctgcaggtccgc
caggcgctcaatacgctgcgagagcagtcccaatggctgggcgtctcgaacgtgctgggt
gaagcactgcgcgcccaggttgcccgcctgccggacatgccaaagccgcagcagctggac
accgagctggctcagctgcgcgtagagcgcctgcactatgaagatttgctcaataaacac
gcccagctacgccaggttcgccaggctgacggcagcccgctgaccgccgagcaaaataag
atcctgcaggcgcagcttcgcacccaacgtgagctgctgaactcgctgctgcagggcggc
gataccctgattctcgagttaaccaagctgaaagtggcgaacagccagcttgaagacgcg
ctgaaagaagtgaatgaagcgacccaccgctacctgttctggacgtctgacgtcagccca
ataggcatcagttggccgctggaaatcgtgcaagatctgcggcgtctggtgtcgctggat
acctttagccagttgggtaaagccgcgatcatgatggtaaccagcaaagaaacgctgctg
ccgctcttcggcgcgctgattctggttgggtttagcattagctcgcgccgtcacttcact
gccttcctcgagcgctccagcgccaaagtcggaaaagtaacgcaggaccacttccgcctg
acgctacgcaccgtgttctggtcgattctggtcgcctctccgctccccgtgctgtgggca
acgctgggttatggtttgcaggaagcgtggccttaccccatcgcggtggcgataggcgac
ggcgttaccgctacggtgcctctactttggggggtgatgatctgcgcgacgttcgcacgc
cctaccgggctgtttgtggtgcattttggctggccgcgcgagcgcgtaggtcgggccatg
cgctactacatcatgagcataggcctgattgtgccgctgatcatggcgctgattatgttc
gacaatctcaacgaccgggaattttcagcctcgttgggcaggctttgcttcatcatgatt
tgcggcgcgttggctatcgtcacgctcagccttaaacgtgccgggctaccgctctatctc
gacaagcagggcgatggtgacaacatcgtgaacaccattctgtggaacctgctgctctgt
gctccgttgatggctatcctggcggctatcgtcggctatctgatgacggctcaggcgctg
ctggcacgtctggaaacctccgtagccatctggttcctgctgctggtgatttatcacatc
atccgccgctggatgcttatccagcgccgccgtctggcctttgaccgcgctaaacaccgc
cgggctgaaatccttgcccaacgagcgcgtggggaagaagatacggcgcatgctaacagc
accgaaggctcggtagaaaccgtggacgagccggaagtcgatctcgataccatcagcgcc
cagtctttgcgcctggttcgctcaattctgatgcttattgccctgctgtcggtgattttt
ctgtggtccgaaatccactcggcgtttggcttcctcggtaacatcacgctgtgggacgtc
acctccactgttcagggtgtggaaagcatcgaaccgattacgcttggcgcggtactgatt
gccattctggtactgattattaccacgcagctggtgcgtaacttaccagcgctgctggag
ctggccattcttcaacacctgaacttaacgccaggcaccggctatgccattaccaccatc
accaaatatctgctgctgctgattggcgggctggtgggcttctcgatgatcgggattgag
tggtccaagctgcagtggctggtagccgcactcagcgtggggttgggcttcggtttacag
caaatcttcgccaacttcgtctctggcctgattattctgttcgagaagccgatacgcatc
ggcgacacggtgaccatccgtgacctgacgggcaccatcacgcgaatcaacacccgtgcg
accaccatcagcgactgggaccgaaaagaaatcatcgttccgaaccaggcatttattacc
gagcagtttatcaactggtcgctttcggactcggtcacgcgtgtggtgctcaccattccg
gccccgtcagaagcgaatacggaagaggtcaccaaagtcctgctggaagccgcgcaccgc
tgcacgctggtgctcgatacgccgcagccggaagcattcctggtcgatctccagcagggt
atccaggtcttcgaactgcgtattcacgcggcggagatgggccaccgaatgccgctgcgc
cacgaaatccaccagctgattctgcagggcttccgcgagcacaacatcgagatgccgttc
ccaccgttccagatgcgtctggaaagcctcagcgggcagcgtagcagtaagacgattaaa
tccgcgggcagagccgccagaacgcctggcagcctgtaa
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