Cedecea neteri SSMD04: JT31_10360
Help
Entry
JT31_10360 CDS
T03298
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
cnt
Cedecea neteri SSMD04
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnt03000
]
JT31_10360
Transcription factors [BR:
cnt03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JT31_10360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
HTH_8
HTH_23
DUF2209
Motif
Other DBs
NCBI-ProteinID:
AIR05002
UniProt:
A0A089PXC5
LinkDB
All DBs
Position
2199763..2200701
Genome browser
AA seq
312 aa
AA seq
DB search
MKIDAEITFRKLEIFMEFMEKGNIARTAEALGISGVSVHRALHTLEEGVRCPLFIHKGRN
LVPLESALTLLEHCKEVVALMARGIDETRQAAGVGQGRLRIGTLYSLTLETVPKLIMGMK
LRRPELEMDLTMGSNQVLLNMLEDGVLDAILISISEGEVDRSRLEVLPMFRDDIFLAAPA
SFPLDTSHPADLREFHGEKFVSLAEGFATYAGFQEAFSVAGFEPEIVTRVNDIFSMVSLV
QAGVGLTLMPGRMKKVYENSVQLLRLAEQYQMKQTIAIVFARNRELDPNLLALAAEGRMY
ARSFIDTPNAPP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgacgctgaaatcaccttccgtaagcttgagatctttatggagtttatggag
aaagggaacattgcgcgcaccgccgaagcgctgggtattagcggggttagcgtgcatcgc
gcgctgcatacgctggaagaaggtgtgcgctgcccgctgtttattcataaagggcgcaac
ctggtgccgctggaatctgcgctcaccctgctggaacactgcaaagaagtggtggcgctg
atggcgcgcggcatcgatgaaacccgtcaggccgcgggcgttggccagggccggctgcgc
atcggcaccctctattccctgacgctcgaaaccgttccgaaactgatcatgggcatgaaa
ctgaggcgaccggagctggaaatggatctcaccatgggctcaaatcaggtgctgctgaat
atgctggaagacggcgtgctggacgccatcctgatttctatttccgaaggcgaagtcgat
cgctcaaggctggaagtcctgccgatgttccgggacgatattttcctcgccgcaccggcc
agcttcccgctcgacaccagccatccggcagatttacgcgagttccacggtgaaaaattt
gtttcgctcgcggaaggctttgctacctacgcgggctttcaggaagcctttagcgtcgcc
ggtttcgaaccggaaatcgtcacccgcgtaaacgacattttctcaatggtcagcctggta
caggcgggcgtcgggctcacgctgatgcccggcagaatgaagaaggtgtatgaaaattcg
gtgcagcttttaaggcttgccgagcagtaccagatgaagcagaccatcgctatcgtcttc
gcccgtaatcgcgaacttgacccgaacctgctggcgctggccgccgaggggcgcatgtac
gcccgctcgtttatcgatacgcctaacgcgccgccttag
DBGET
integrated database retrieval system
