Cedecea neteri SSMD04: JT31_11250
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Entry
JT31_11250 CDS
T03298
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
cnt
Cedecea neteri SSMD04
Pathway
cnt00730
Thiamine metabolism
cnt01100
Metabolic pathways
cnt01240
Biosynthesis of cofactors
Module
cnt_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JT31_11250
Enzymes [BR:
cnt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
JT31_11250
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AIR05171
UniProt:
A0A089Q1R9
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Position
2382944..2384845
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AA seq
633 aa
AA seq
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MSASEKKPGRREQRAAAQHFINTLEGTAFPNSRRIYLTGSREDIRVPMREIQLSPTLTGG
NNDTPQYQPNDAVPVYDTSGPYGDPAIAINVLSGLSPLRSAWIAERRDSETLDERSSAYT
KARLADDGLDELRFETQLAPRRAAAGKCVTQLHYARQGIVTPEMEFIAIRENMGRERIRD
EVLRHQHPGEGFGARLPENISPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNA
NIGNSAVTSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQ
ALEKVNGIAEDLNWEIFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSI
MAKWCLSHHQENFLYEHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGE
LTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTS
GIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDN
AMSKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKITQEVR
DYAAKQAIDAGMEEMSQDFRARGGEIYLRQEEA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatctgaaaaaaaaccgggccgacgcgaacagcgtgcagccgcccaacacttt
atcaatacgcttgaaggcaccgccttccccaactcccggcgcatctatctgaccggatca
cgcgaagatatccgcgtcccaatgcgggaaattcagctcagcccgacgctcaccggcggc
aacaatgatactcctcaatatcagccgaacgatgctgtccccgtctacgatacgtctggc
ccttatggcgaccccgcaatcgctataaacgtgttaagcggactttcccctcttcgcagc
gcctggattgccgaacgccgtgacagcgaaacgctggatgaacgcagctcagcttataca
aaagcacgtctggccgacgacggcctggacgagctgcgctttgaaactcagctagcgccc
cgtagggcggcagcgggaaaatgtgtcacccagctgcattacgcccggcaaggcattgtc
accccggagatggagttcatagccattcgcgaaaatatggggcgcgaacgcatccgcgat
gaggtcctgcgccaccagcatccgggcgaaggcttcggcgcaaggctgccggaaaacatc
tcgccggagttcgtgcgcgatgaagtcgccgccggccgagcgattattcccgccaatatc
aaccaccctgaatcagagccaatgattatcggccgcaacttcctggtgaaggtgaacgcc
aatatcggcaattcggcggtcacgtcctctattgaagaagaggtggagaagctggtgtgg
gccacccgctggggtgccgatacggtgatggatctctcgaccggccgctatattcacgaa
acgcgggaatggatcctgcgcaacagcccggtgcccattggcacggtgccgatttaccag
gcgctggagaaggttaacggcatcgccgaagacctgaactgggaaatattccgcgacacg
ttgctggaacaggcagagcaaggcgtggattacttcactattcacgcgggcgtgctgctg
cgctacgtgccgatgacggcgaaacgcctgaccggcatcgtgtcgcgcggtgggtcgatt
atggcgaagtggtgcctgtcccatcatcaggaaaatttcctgtacgagcacttccgcgag
atttgcgagatctgcgccgcctacgacgtttcactttcgctgggcgatggtttacgcccc
ggttcaatacaggatgccaacgacgaagcgcagtttgccgagctgcatacgctgggcgag
ctgaccaaaatcgcctgggagtatgacgtccaggtgatgattgaaggcccgggccacgtg
ccgatgcagatgattcgccgcaacatgaccgaagagctggagcattgccacgaagcgcct
ttctacaccctcggcccgctaacgaccgatatcgcgccgggctacgatcatttcacctcc
ggcattggcgccgccatgatcggctggtttggctgcgccatgctctgctacgtgacgccg
aaggagcatcttggcctgccgaacaaagaggacgttaaacaggggctgattacctacaag
attgccgcccacgccgctgacctggccaaaggtcatcctggcgcacaaatccgcgataac
gcgatgtccaaagcacgctttgaattccgctgggaagaccagttcaacctggcgctcgat
cccttcaccgctcgcgcttaccacgatgaaaccctgccgcaggaatccggcaaagtcgca
catttttgctctatgtgcggccctaaattttgctcaatgaaaatcacgcaggaagtgcgg
gactacgccgcaaaacaggcgatagacgcaggtatggaagagatgtcccaggactttcgc
gcccggggcggtgaaatttatctcagacaggaggaagcataa
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