Cedecea neteri SSMD04: JT31_11420
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Entry
JT31_11420 CDS
T03298
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
cnt
Cedecea neteri SSMD04
Pathway
cnt00071
Fatty acid degradation
cnt00280
Valine, leucine and isoleucine degradation
cnt00310
Lysine degradation
cnt00362
Benzoate degradation
cnt00380
Tryptophan metabolism
cnt00410
beta-Alanine metabolism
cnt00640
Propanoate metabolism
cnt00650
Butanoate metabolism
cnt00907
Pinene, camphor and geraniol degradation
cnt00930
Caprolactam degradation
cnt01100
Metabolic pathways
cnt01110
Biosynthesis of secondary metabolites
cnt01120
Microbial metabolism in diverse environments
cnt01200
Carbon metabolism
cnt01212
Fatty acid metabolism
Module
cnt_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JT31_11420 (fadB)
00650 Butanoate metabolism
JT31_11420 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
JT31_11420 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JT31_11420 (fadB)
00310 Lysine degradation
JT31_11420 (fadB)
00380 Tryptophan metabolism
JT31_11420 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JT31_11420 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JT31_11420 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JT31_11420 (fadB)
00930 Caprolactam degradation
JT31_11420 (fadB)
Enzymes [BR:
cnt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
JT31_11420 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
JT31_11420 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
JT31_11420 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
JT31_11420 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AIR05196
UniProt:
A0A089Q1U6
LinkDB
All DBs
Position
2418676..2420865
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGETLHLDWLEDGIAELVFDAPGSVNKLDTATVASLGEALTVLEKQPNLKGLLLSSS
KSAFIVGADITEFLSLFLVPAEQLTHWLQFANSVFNRLEDLPVPTIAAVNGYALGGGCEC
VLATDYRLATTDARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIITAGKDVGAAEAQK
LGLVDGVVKTEKLRDGALAILRQAIKGELDWQAKRAPKLQPLKLSKIEAGMSFTIAKGMV
AQIAGKHYPAPMTAVKTIEAAAGLGRDEALKLETQSFVPLARSNEARALVGIFLNDQFVK
GQAKKLTKDIETPKHAAVLGAGIMGGGIAYQSAWKGVPVLMKDISEKSLALGINEASKLL
NKQLERGKIDGMKLAQVISTIQPTLEYAGFDRVDVVVEAVVENPKVKKAVLAETEDKVRP
DAVLASNTSTIPISELASGLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDVTIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRQIDKAMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMSKDYRDAIDVLFDAGRYGQKTQQGFYRFKEDSKGKP
RKEQDEAVDSLLAEVSQPKRNFSDEEIIARMMIPMVNEVVRCLEEGVIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYFDMAQQYQNLGPLYVVPEGLKAKASRNEPYYPPVEPA
RPASDLKSA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggtgaaaccctacatctcgactggctggaagacggcattgccgaactg
gtgtttgatgcccccggctccgtcaacaagctggatacggcgaccgtcgccagcctcggc
gaagcgctgaccgtgcttgaaaagcagccgaacctcaaaggcctgctgctgagctccagc
aagtccgcctttatcgttggcgccgacattactgaattcctctcgctgttcctggtccct
gccgaacagctgacccactggctgcagttcgccaacagcgtatttaaccgcctggaagat
ctgccggtcccgaccattgcagccgtgaatggctatgcgctgggcggcggatgcgaatgc
gtactggcgacggattaccgcctggccacaacggatgcccgcattggcctgccggaaacc
aagttaggcatcatgccaggcttcggcggttccgttcgtctgcctcgtttgttaggtgcg
gatagcgcgcttgaaattattaccgcgggcaaagacgtcggtgcggcagaagcgcaaaag
ctgggcctggttgatggcgtagtgaaaaccgaaaagctgcgcgacggtgcgctggcgatt
cttcgtcaggcaatcaaaggcgagctggactggcaggctaagcgcgcgccgaaactgcaa
ccgctgaaactgagcaaaattgaagccggcatgagctttaccatcgccaaaggcatggtg
gcacagatcgccggtaaacattatccggccccgatgaccgcggtaaaaacgattgaagcc
gccgctggccttggtcgtgatgaagccctgaagctggaaacccaaagctttgtgccgctg
gctcgctccaatgaagcccgcgcgctggtcggcatcttcctgaacgatcagtttgttaaa
ggtcaggcgaaaaagctcaccaaagatattgaaacgcctaaacacgcggccgtactcggc
gcgggcattatgggcggcggcattgcctaccagtctgcctggaaaggcgtgccggtatta
atgaaggacattagcgaaaagtcgctggcgctgggcattaacgaagccagcaagctgctg
aacaagcagcttgaacgcggcaaaattgacggcatgaagctggcgcaggttatttcgacc
attcagccaacgctggaatatgccgggtttgatcgtgtagacgtcgttgtcgaagccgtg
gttgaaaacccgaaagtgaaaaaggcggtgctggcagaaaccgaagataaggttcgtccg
gacgccgttctggcttccaacacctccaccattcctattagcgaactggcaagcgggctg
aaacgcccggaaaacttctgcggcatgcacttctttaacccggttcaccgtatgccgctg
gttgaggtcattcgtggggagaaaacctcggacgtgacgattgccaaagtggtagcctgg
gcgagcaaaatgggcaaaacgcctatcgtggtaaacgactgcccgggcttctttgtgaac
cgcgtgctgttcccctacttcgcaggctttagccaactgctgcgcgacggcgcagacttc
cgccagattgataaagcgatggaaaaacagttcggctggccaatgggcccggcttacctg
ctggacgtggtcgggattgataccgcccatcacgctcaggcagtgatggccgcaggcttc
ccgcagcgcatgagcaaagattaccgcgacgcgatagacgttctgttcgatgccgggcgc
tacggccagaaaacccagcagggcttctaccgctttaaagaagacagcaaaggcaaaccg
cgcaaagagcaggacgaagctgtcgatagcctgctggcagaagtcagccagccgaagcgt
aactttagtgacgaagaaattatcgcccgcatgatgatcccgatggtcaacgaagtcgtt
cgttgcctcgaagaaggcgtgattgccagcccggcggaagccgatatggcgctggtttac
ggcctcggtttccctccgttccacggtggtgcattccgctggctggataccctgggcagc
gcgaaatatttcgatatggcgcagcagtaccaaaacctcggcccgctgtacgtcgtgcct
gaaggcctgaaggccaaagcatcacgcaatgagccgtactatccgccggttgagcctgcc
cgcccggccagtgacctgaaaagcgcctga
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