Cedecea neteri SSMD04: JT31_14910
Help
Entry
JT31_14910 CDS
T03298
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cnt
Cedecea neteri SSMD04
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cnt03016
]
JT31_14910 (truB)
Enzymes [BR:
cnt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JT31_14910 (truB)
Transfer RNA biogenesis [BR:
cnt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JT31_14910 (truB)
Prokaryotic type
JT31_14910 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AIR05859
UniProt:
A0A089Q628
LinkDB
All DBs
Position
3148513..3149457
Genome browser
AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGIVVQERPVNFSAGQLAAALETFRGDTE
QVPSMYSALKHQGKPLYEYARAGIEVEREARPITVYELLFIRHEGDELELEVHCSKGTYI
RTIVDDLGEKLGCGAHVIFLRRLAVSKYPIERMVTLEQLSELVEQAHRQEVEPADLLDPL
LMPMDSPASDFPLVNLLPEVAVYFKNGNPVRAAGVQAEGLVRVTEGEEQKFIGMGIIDDE
GRVAPRRLVVEYPV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgtggtcgtgatattcatggtgtactgttgctggacaagcct
caggggctctcttccaacgatgcactacaaaaagtaaagcgcctttataacgcgaaccgc
gcgggccataccggtgcgctggatccgctggcgaccgggatgttgccaatctgcctcggt
gaagcaacgaagttctcccaatatctgctggactccgacaagcgttatcgcgtgattgct
aaacttgggcagcgtaccgacacttctgatgccgacggcattgtcgttcaggaacgcccg
gttaactttagcgccgggcagcttgctgccgcgctggagactttccgcggggacaccgag
caggttccatcgatgtattctgcgctcaagcatcagggcaagcccctgtacgaatatgcg
cgcgcgggtattgaggttgaacgtgaagctcgcccaatcacggtgtatgaactgctgttt
attcgccatgaaggggatgaactggagctggaggttcactgttctaagggaacgtacatc
cgtacgatcgttgacgatctcggtgaaaaacttggctgcggtgcgcatgttattttcctg
cgtcgcctggcggtaagtaaatatccgattgagcgcatggtcactctggaacagcttagt
gagctggtcgagcaggcacaccggcaggaggtcgagcctgcagacctgttggatccgctg
ctgatgccaatggatagccccgcctcagattttccgctggtgaacttgctgccagaggtt
gccgtttattttaaaaacggcaatccggtacgcgctgcgggtgttcaggctgaaggcctg
gtgcgcgttaccgaaggcgaagagcagaaatttatcggtatggggataatcgatgacgag
ggccgggtcgctccgcgccgtctggtcgttgaatatcccgtctga
DBGET
integrated database retrieval system
