Cedecea neteri SSMD04: JT31_16130
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Entry
JT31_16130 CDS
T03298
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cnt
Cedecea neteri SSMD04
Pathway
cnt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JT31_16130 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cnt01007
]
JT31_16130 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cnt03016
]
JT31_16130 (lysS)
Enzymes [BR:
cnt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
JT31_16130 (lysS)
Amino acid related enzymes [BR:
cnt01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JT31_16130 (lysS)
Transfer RNA biogenesis [BR:
cnt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JT31_16130 (lysS)
Prokaryotic type
Other AARSs
JT31_16130 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AIR06090
UniProt:
A0A089RHY7
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All DBs
Position
3410696..3412213
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AA seq
505 aa
AA seq
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MSEQQAQGVDAAADLNNELKARREKLVALREQGIPFPNDFRRDHTSDQLHADFDAKENEE
LEDLGVEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDLGD
ILGARGKLFKTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDDS
RNTFKVRSQIMAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAP
ELYLKRLVVGGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRT
LAQDVLGTTEVQYGEETFDFGKPFEKLTMREAIKKHRPETNLADLDNFDSAKAIAESIGI
KIEKSWGLGRIVTEIFEEVAESHLIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGG
REIGNGFSELNDAEDQAQRFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPALRPTK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaacaagcacagggcgttgacgcagcagccgatcttaataatgaactgaaa
gcgcgccgtgagaagctggtggctctgcgtgagcagggtatcccattcccgaacgatttc
cgtcgtgaccacacctcagaccaactgcacgctgacttcgatgcgaaagagaacgaagag
ctggaagacctgggcgttgaggtaagcgtggctggccgtatgatgacccgccgtatcatg
gggaaagcctccttcgtgacgctgcaggacgttggcggccgtattcagctgtatgtgtcc
cgcgacgacctggcggaaggcatctacaacgagcagttcaagaaatgggacctgggcgat
atcctgggcgcgcgcggcaagctgttcaaaaccaaaaccggcgagctgtccattcactgt
agcgaactgcgtctgctgaccaaggcgctgcgtccgctgccggacaaattccacggcctg
gccgatcaggaaacccgctaccgtcagcgttacctggatctcatcgctaacgatgactct
cgtaacactttcaaagtgcgttcgcagatcatggccggtattcgccagttcatggtgggt
cgcgactttatggaagttgaaaccccgatgatgcaggtgattcctggcggcgcgtctgcc
cggccgttcatcacgcaccacaacgcgctggacatcgacatgtacctgcgtatcgcgcct
gagctgtacctgaagcgcctggtggtgggtggtttcgaccgcgtcttcgagatcaaccgt
aacttccgtaacgaaggcatttctccgcgtcataacccagagttcaccatgatggaactc
tatatggcctacgcggactacaaagacctgattgagctgaccgaatccctgttccgcacc
ctggcgcaggatgttctgggcaccaccgaagtgcagtacggtgaagaaaccttcgacttc
ggtaagccgtttgaaaaactcaccatgcgtgaagctatcaaaaagcaccggcctgaaacc
aacctggccgatctggataatttcgactctgcgaaagccatcgcggaaagcatcggcatc
aaaatcgagaagagctggggtctgggccgtatcgtgaccgagatcttcgaagaggttgcg
gaaagccacctgattcagccgaccttcatcaccgaatacccggctgaagtttctccgctg
gcgcgccgtaacgacgaaaaccctgaaatcaccgaccgctttgagttcttcatcggcggc
cgtgaaatcgggaacggcttctccgagctgaacgatgcggaagaccaggcgcagcgcttc
caggatcaggttgatgcgaaagcggcaggcgacgacgaagccatgttcttcgacgaagac
tacgtcaccgccctggagcacggtctgccaccaacggcgggtctgggcattggtatcgac
cgtatggttatgctgttcaccaacagccacaccatccgcgacgttatcctgttcccggct
ctgcgtccgactaagtaa
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