Cedecea neteri SSMD04: JT31_16385
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Entry
JT31_16385 CDS
T03298
Symbol
recC
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cnt
Cedecea neteri SSMD04
Pathway
cnt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JT31_16385 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnt03400
]
JT31_16385 (recC)
Enzymes [BR:
cnt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JT31_16385 (recC)
DNA repair and recombination proteins [BR:
cnt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JT31_16385 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AIR06136
UniProt:
A0A089Q4C7
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All DBs
Position
3465974..3469345
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AA seq
1123 aa
AA seq
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MLRVYHSNRLDVLEAIMEFIVERQPLPDPFEPEVVLVQSTGMAQWLQMTLAQKFGIAANI
EFPLPASFIWDMFVRVLPDIPKESAFNKQSMSWKLMTLIPNMLDKPEFTLLSHYLREDDS
SRKLFQLSSRIADLYDQYLVYRPGWLSRWEKGELVDGAGESQLWQAPLWAELVRYTAELG
QPEWHRANLYQRFISALENSDVCPSGLPPRVFICGISALPPVYLQALQALGKHIDVHVLF
TNPCRYYWGDIKDPAFLARLVSRRRRLHQADREQTLFKDNDKASSLFNELGEQDVGNSLL
ASWGKLGRDYSFLLSELERFEEVDVFVDLEPDNLLHGLQHDLLELKDSQVLGLTVDEYER
SDGKRRLDLKDRSLTFHECHSPQREVEVLHDQLLAMLEADPELTPRDIIVMVADIDSYSP
FIQAVFGSARDERWLPFAISDRRARQAHPALQAFILLLGLPESRFAAEDVLALLEVPALA
ARFSIDEEGLRYLRKWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESQ
AGVWDSVLPYDESSGLIAELVGQLAELLMQLNRWRLLLTQERPLDEWLPLCREMLSSFFL
PDGETEAALALIEQQWQEMIEKGTEAAYQQPVPLTLLRDELAQRLDQERISQRFLAGPVN
FCTLMPMRAIPFKVVCLLGMNDGVYPRTLAPLGFDLMSQHPQRGDRSRRDDDRYLFLEAL
ISAQQRLYISYIGRSIQDNSRRYPSVLVEELLDYVARSHYLPGDAECNADDSSEHVRKHL
VTLHARTPFDSSNYFAEGEQQSFAQEWLPAASGNGQAHAHFIQPLTAEPCDEISLEQLQR
FWRHPVRAFFQMRLGINFRLEDTELPDEEPFTLDVLDRFQLNQHLLNTLVQQEDPHQLFV
RYRAAGVLPYGAFGEILWENQRNEMNTLAEKVLAERQKGESREVDLHIDGTRVTGWLSDV
QADGLLRWRPSVLNVAHGMQLWIEHLVHCASGYAGKSRLYGRKDSQWRFPAMESGEAKAW
LSQLLEGYKEGLRQPLLLLHNSGGAWIKACYDPLNNAILWDEETQQKARTKLLAAWEGNH
MVEGEGADIWLQRLYRTLDAEYYEAILTEAERYLLPLFRFNQP
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtgtttaccattccaaccgccttgatgtgctggaagctatcatggagttcatt
gtagagcgccagccgctgccggatccttttgagccggaggtcgtgctggttcaaagcacc
gggatggcgcagtggctgcaaatgactctggcgcaaaagtttggcatcgcggcaaacatt
gaattcccgctgccggccagctttatctgggacatgttcgtgcgggtgttgccggatatc
cctaaagaaagtgctttcaacaagcagagtatgagctggaagctgatgacgcttatcccg
aacatgctcgacaaaccggaatttaccctgctcagccactatctgcgggaggatgacagc
agccgcaagctgttccaactgtcttcgcgcattgccgacctctatgaccagtacctcgtc
tatcgccccggctggctaagccgctgggaaaagggggagcttgttgacggcgcgggagag
tctcagctctggcaggctccgctgtgggcagagcttgtacgctacacggccgagctgggg
cagcccgaatggcaccgtgccaacctctaccagcgtttcattagtgctcttgaaaacagc
gatgtttgcccttcgggacttccgcctcgcgtctttatttgtggtatttccgctctgccg
ccggtttaccttcaggccctgcaggcgctgggtaagcatattgacgtccacgtgctgttt
accaacccctgccgttactactggggggacatcaaagatcccgcgttccttgcccgcctg
gttagccgtcgtcgtcgcctgcatcaggccgatcgggaacagacgctgtttaaagataac
gacaaagcctcttcgctgtttaatgaactcggcgagcaggatgtgggcaattccctgctg
gcttcctgggggaaattggggcgcgactactccttcctgctttccgagctggaacgcttt
gaagaggtcgatgtttttgtcgatttagagccagataatctcctgcacgggctgcagcac
gatctgctggagctgaaagattcgcaggtcctggggctgacggttgatgagtacgagcgc
agcgacggcaaacggcggctggatcttaaagatcgttccctgacgttccatgaatgtcac
agcccgcagcgcgaagttgaagttttgcatgaccaactgctggcgatgctggaagctgac
cctgagctaacgccgcgcgatatcatcgtgatggtggcagatattgatagctacagcccg
tttattcaggccgtgtttggcagcgcacgtgatgagcgctggctgccgtttgctatttct
gaccgacgggcacgtcaggcgcacccggcgcttcaggcgtttattttactgcttggacta
ccggaaagccgctttgcggcagaggatgtgctggcgctgctggaagtgcccgcgctggcg
gcgcgcttctctattgatgaagaagggctgcgctacctgcgtaaatgggtgaatgagtcc
ggtattcgctggggcattgacgacgacaacgtgcgtgagttagagctgccggctaccggg
cagcatacctggcgttttggtctgacccgcatgctgcttggctatgccatggaaagccag
gccggggtttgggattcggtcctgccctacgatgagtcgagcggcctgattgccgagctg
gttgggcagcttgcggaactgctgatgcagcttaaccgttggcgtctgttgctgactcag
gaacgccctctggatgaatggctcccgctgtgccgggaaatgctgagcagcttcttcctg
cctgacggtgaaactgaagcggcgctggcgctgattgagcagcagtggcaggagatgatt
gagaaaggaaccgaggccgcctaccagcagcctgtgccgttaaccttgctgcgcgatgaa
ctggctcagcgtctcgatcaggaacgtatcagccagcgattcctcgccgggccggtaaac
ttctgtactctgatgccgatgcgtgccattccgtttaaggtcgtttgcctgcttggcatg
aatgacggcgtctacccgcgaacgcttgcgccactgggctttgacctgatgagccagcat
ccgcagcgcggcgatcgcagccgccgggacgacgatcgctacctgttcctggaagcgtta
atttccgcgcagcagcggctgtacattagctatatcggccgttcgattcaggataacagc
cggcgctacccgtcagtgctggtggaggagttgctggactatgtagcccgcagccattac
ctccccggtgatgccgaatgcaacgccgatgacagcagcgagcatgttagaaagcacctg
gtcacgcttcatgcccgcacgcctttcgacagcagtaactactttgccgaaggcgagcag
cagagctttgctcaggagtggctgccagcggccagcggcaacgggcaggctcatgctcac
tttattcaacctctgacagctgagccctgcgacgaaatatcccttgagcagctacagcgc
ttttggcggcacccggtgcgggcatttttccaaatgcgcctggggattaatttccgtctg
gaagatacggaattaccggatgaagagccctttaccctcgacgtgctcgatcgttttcag
ctaaaccagcacctgcttaatacccttgtccagcaagaagatccgcaccagctgtttgtg
cgttatagggccgcaggtgttctgccgtacggtgcttttggtgaaatcctttgggaaaat
cagcgcaatgaaatgaacacgctggctgagaaagtgctggcagagcgacaaaaaggggag
agtcgtgaagttgatcttcatatcgacggaaccagagtgacgggctggctgtcggacgta
caggcagatgggctattacgctggcgcccttcggtgctgaacgtagcccacggtatgcag
ctgtggattgagcacctggtccactgtgccagcggctatgctggcaaaagccggctgtac
ggccgcaaagattcgcagtggcgcttccctgcgatggaaagtggtgaggcaaaggcctgg
ctgtcgcaactgcttgagggctataaagaagggcttcgtcagccattgctgctgctgcat
aacagcggtggggcgtggataaaagcctgttatgacccgctaaataatgccattttatgg
gatgaggagacgcagcagaaggcgcgcactaagctgctggctgcgtgggaaggaaaccat
atggttgaaggggaaggcgctgatatttggctgcaacgtttgtaccgtacccttgatgcc
gagtactacgaagcgatacttacagaggccgagcgctacctgcttcctctgttccgtttc
aaccaaccctga
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