Cedecea neteri SSMD04: JT31_16400 Help Entry JT31_16400        CDS       T03298                                  Symbol recD Name (GenBank) exonuclease V subunit alpha   KO K03581   exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] Organism cnt  Cedecea neteri SSMD04 Pathway cnt03440   Homologous recombination Brite KEGG Orthology (KO) [BR:cnt00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     JT31_16400 (recD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cnt03400]     JT31_16400 (recD) Enzymes [BR:cnt01000]  3. Hydrolases   3.1  Acting on ester bonds    3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters     3.1.11.5  exodeoxyribonuclease V      JT31_16400 (recD) DNA repair and recombination proteins [BR:cnt03400]  Prokaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     RecBC pathway proteins      JT31_16400 (recD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_19 RecD_N AAA_30 UvrD_C_2 Helicase_RecD Viral_helicase1 AAA_11 SH3_13 AAA_22 UvrD-helicase SLFN-g3_helicase AAA_16 PhoH nSTAND3 UvrD_C Herpes_Helicase AAA_28 CbiA T2SSE DEAD NPHP3_N MukB SRP54 AAA AAA_24 TrwB_AAD_bind NTPase_1 ATPase Motif Other DBs NCBI-ProteinID:  AIR06139 UniProt:  A0A089Q6R9 LinkDB All DBs Position 3475922..3477763 Genome browser AA seq 613 aa AA seqDB search MSMSQLLNQAVTLKALRPLDSQFAMMVANDAQPAVMLAAALLSHESGEGHVCLPLERITP AFVFAGKHPELVAQLFAEAEPGMGWESALLASHSVSSNDEATPLKLIGNRLYLNRMWSNE QRVAAFFGERNQPVAVDEARLRDSLDALFGSSQQTDWQKVAAAVALTRRISVISGGPGTG KTTTVAKLLAALVQLTDGQPLRIQLAAPTGKAAARLTESLGSALRQLPLSDEQKKRLPDE ASTLHRLLGAQPNSQRLRHHAGNPLHLDVLVVDEASMVDLPMMSRLIDALPERARVIFLG DRDQLASVEAGAVLGDICHYVNDGYSAQRAEQLQRLTGCEVPVGDSDRASALRDGLCLLR KSYRFDSQSGIGQLAFAVNASDSRQVKAAFGQGFTDISLQPLLEPEDYTAMIADVVSGYG EYLKQVRQKAEPAEILSAFGRYQLLCALREGPFGVSGLNERIEQAFVQARLIQRPSQALS RWYDGRPVMIARNDSSLGLFNGDIGIALQREEGLRVWFPMPDGKVKSVQPSRLPAHDTAF AMTVHKSQGSEFDHAALVLPNQFVPVVTRELVYTAITRARKQLSLYADERVLNKAIATRT ERRSGLMEIFSGE NT seq 1842 nt NT seq  +upstreamnt  +downstreamnt gtgagcatgtcacagttactcaaccaggcggtgacgctgaaagccctcaggccgctggac tcgcagtttgccatgatggtggctaacgatgcgcagcccgccgtgatgctggccgccgcg ctgcttagccacgagtcaggggaagggcacgtttgcctgccgcttgagcggataacgcct gcctttgtcttcgccggcaaacatcctgagctggtggctcaactcttcgctgaggcagag ccgggcatgggctgggaaagcgcattactggcttctcattcggtgagttcgaacgatgaa gccacgccgttaaaactgatcggcaatcgtctgtacctcaaccgcatgtggagtaacgag cagcgggtagccgccttttttggcgagcgtaatcagccggtcgcggtagatgaagctcga cttcgggatagcctcgacgcgctgtttggcagcagccagcagacggactggcaaaaggtg gccgcggcggtcgcgctgacccggcgtatctcggttatctccggcgggccgggcaccggc aaaaccacgacggtagcaaaactgctggccgctttggtgcagcttaccgatggtcagcca cttcgcattcagcttgcggccccaacgggcaaggctgccgcacgcttaacggagtcatta ggcagcgcgctgcgccagctgccgctgagcgacgagcagaaaaagcgcctgccggatgag gcctcaacgttgcatcgcctgttaggggcgcagccaaacagccagcgtctgcggcaccac gccggtaacccactgcaccttgatgtgctggtggtggatgaggcgtcgatggtggacttg ccgatgatgtccaggcttatcgatgctctgcctgagcgagcaagggtcatcttcctcgga gacagagatcagctggcgtccgtggaggcgggcgcggttctgggcgatatctgccattac gtgaatgacggttattcggcgcagcgtgcggagcaattacagcggctcacgggctgtgag gtgcccgtcggcgatagcgaccgggcaagcgcgctgcgtgacgggctttgcctgctgcgt aaaagctaccgattcgacagccagtccggcatcggtcagctggcgtttgcagtcaatgcg agcgacagcaggcaggttaaggccgcgtttggacagggattcaccgacatttcgctgcag ccgctgcttgaacctgaagattacacggcgatgattgccgacgtggtgagcggctacgga gagtatttaaagcaggtgcggcagaaagccgagccagccgaaattcttagcgctttcggt cgttatcagctgctgtgtgcattgcgtgaaggtccctttggcgttagcggcctgaatgag cgcattgaacaggcgtttgtacaggcgcgtctgattcagcggccctctcaggcgctttcg cgctggtacgacgggcgtccggtgatgattgcccgtaatgacagctcgcttgggctgttt aacggtgatatcgggattgctttgcagcgtgaagaggggcttcgggtctggttcccgatg cccgacggcaaggtgaagtcagttcagccaagccgcctgccagcacacgacacggctttc gccatgacggtgcataagtctcagggctctgagtttgaccatgccgcattagtgctgcca aaccagtttgtgccggtggtgacgcgcgagctggtttacacggcaattacacgcgcccgt aagcagctatcgctgtatgccgacgaacgcgttttgaataaagctatagccacgcgtacg gagcgccgcagcgggctaatggagattttctccggggaataa

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