Cedecea neteri SSMD04: JT31_16730
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Entry
JT31_16730 CDS
T03298
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
cnt
Cedecea neteri SSMD04
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnt03021
]
JT31_16730
Transcription machinery [BR:
cnt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JT31_16730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AIR06200
UniProt:
A0A089RI91
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All DBs
Position
3542123..3543115
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AA seq
330 aa
AA seq
DB search
MSQNTLKVNELNEDAEYDENGVEAFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQL
YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYSNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKDNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQTQGLNLEALFRE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaatacgctgaaagttaacgagttaaacgaagacgcggaatatgatgagaac
ggagttgaggcttttgacgaaaaagcccttgtagaagaggaacccagtgataacgacctt
gcagaagaagagctgttgtcacagggtgctacacagcgtgtactggatgcgactcagctt
tatcttggagagatcggttactctccattattaacagccgaagaagaagtttactttgct
cgccgcgcactgcgcggtgatgtagcctcccgccgacgcatgatcgaaagtaacctgcgt
ctggtggtcaagattgcccgtcgttacagcaatcgcggtctggctttgctggacctgatt
gaagagggtaacctggggcttattcgtgccgttgagaagttcgatccagaacgtggattc
cgtttctcaacgtacgccacatggtggattcgtcagaccatcgaacgggcaatcatgaac
caaacccgtacgattcgcctgccgattcacattgtgaaagagctgaacgtttacctgcgt
accgctcgcgaactctcccataagctcgaccacgagccgagtgcggaagagattgccgag
cagctggataaaccggttgatgacgttagccgtatgctgcgtctcaacgagcgcattacc
tcggtagacaccccattgggcggtgactctgagaaagcgctgctggatatcctcgcggac
gagaaagacaacggaccggaagacaccacgcaagacgatgatatgaaacagagcatcgtg
aagtggttgttcgaactgaacgctaagcagcgtgaagtgctggctcgtcgttttggtctg
ctgggttatgaagctgcaacgctggaagatgtgggtcgtgaaatcggcctgactcgtgaa
cgcgttcgtcagattcaggttgaaggcctgcgccgtctgcgtgaaatcctgcagactcag
gggctgaacctcgaagcgctgttccgcgaataa
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