Cedecea neteri SSMD04: JT31_18040
Help
Entry
JT31_18040 CDS
T03298
Name
(GenBank) transcriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
cnt
Cedecea neteri SSMD04
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnt03000
]
JT31_18040
Transcription factors [BR:
cnt03000
]
Prokaryotic type
Helix-turn-helix
Other families
JT31_18040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
GAF_2
AAA_5
Mg_chelatase
AAA
AAA_16
AAA_2
IstB_IS21
HTH_8
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIR06444
UniProt:
A0A089Q7M3
LinkDB
All DBs
Position
3823237..3824757
Genome browser
AA seq
506 aa
AA seq
DB search
MSLSMSSLAAIAIELQSGISHSDRFSRVIRTLRKLLGGDATALLRYESRHFYPLAIDGLA
VDVLGRRFAVDAHPRLEAIARAGDVVRFPADSELPDPYDGLIPEHEDLKVHACLGLPLFA
DQNLIGALTVDGMDPHQFDGFSDEELRLIGVLASGALNNALLLEQLEKQTPEGTVQPAIA
RGVVGEMIGRSPGIIQLKKEIGIVAASDLNVLITGETGVGKELVARAIHAGSARAANPLV
YLNCAALPESVAESELFGHVKGAFTGAIHHRTGKFEMADNGTLFLDEIGELPLALQAKLL
RVLQYGDIQRVGDDRSQRVDVRVLAATNRDLRQQVVAGAFRADLFHRLSVFPLHVPPLRE
RGGDIALLAGFFCEQSRVKMGLKQVVLSEAARVQLAQYGWPGNIRELEHAIYRAIVLARA
GHPQGELVLLPQHFQLSGQADGAFPEPETLTQTPPSASLREATDAFQRVRIIAALAGNGN
NWAASARQLGVDVANLHRLAKRLGVK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtcgatgtcttctctcgccgccattgcaatcgaactgcaaagcggcatcagc
cattctgatcgcttttctcgcgttatccgcacgctgcgaaagctgctcggcggcgatgcc
acggcgctgctgcgctacgagtcgcgccatttttacccgctggcgatagacggcctggct
gtcgacgtgctggggcggcgctttgccgttgacgctcacccacgcctggaggctatcgcc
cgcgcaggtgacgtggtgcgttttccggccgacagcgagctgcccgacccgtacgacggc
cttattcccgaacacgaagacctcaaggttcatgcctgcctggggctgccgctgtttgcc
gaccagaatcttatcggggcgctgaccgtggacggcatggatcctcaccagttcgacggc
ttcagcgatgaggaactcaggctgattggcgtgctggcttccggggcgctgaataacgcc
ctgctgctcgaacagcttgagaagcaaacgccggaaggcacggtgcagcccgccattgcg
cgcggcgtggtgggggagatgattggccgctcgccgggcatcatccagttgaaaaaagag
atcgggattgttgccgcctcggatctcaacgtgctgatcaccggcgaaacgggcgtcggc
aaagagctggtggcgcgggcgattcatgccggttctgcaagggcggcgaacccgctggtt
taccttaactgcgccgcactgccggaaagcgtggcggagagcgagctgttcggccatgtg
aaaggtgctttcaccggcgcaattcaccaccgtaccggtaagtttgaaatggcggataac
ggcacgctgttcctggacgagataggtgagctgccgctggcattgcaggccaagctgctg
cgcgtgctgcagtacggcgatatccagcgcgtgggcgatgatcgcagccagcgggtggat
gtccgggtgctggccgccactaaccgcgatctgcgccagcaggtggttgccggggcgttt
cgcgcagacttgttccaccgcctgagcgtctttcctctgcacgttccaccgctgcgtgag
cgagggggcgatattgcgctgctggccggttttttctgcgagcaaagtcgcgtgaaaatg
gggcttaagcaggtggtgctgagcgaagctgcgcgcgtgcagcttgcacagtacggctgg
ccggggaacatccgcgagctggagcatgccatttaccgcgctattgtgctggctcgtgcc
ggtcatccgcagggagagcttgtcctgctgccccagcacttccagctttccggccaggcg
gatggtgcattccccgagccggaaaccttaactcaaacgcctccttcggccagcctgcgc
gaagctaccgatgcgtttcagcgcgtcagaattattgcagcgcttgcgggcaacggtaat
aactgggcggctagcgcccggcagctgggtgtagacgttgccaacctgcatcggctggcg
aagcggctgggggtgaagtaa
DBGET
integrated database retrieval system
