Cedecea neteri SSMD04: JT31_18185
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Entry
JT31_18185 CDS
T03298
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cnt
Cedecea neteri SSMD04
Pathway
cnt03030
DNA replication
cnt03430
Mismatch repair
cnt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JT31_18185
03430 Mismatch repair
JT31_18185
03440 Homologous recombination
JT31_18185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnt03032
]
JT31_18185
03400 DNA repair and recombination proteins [BR:
cnt03400
]
JT31_18185
Enzymes [BR:
cnt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JT31_18185
DNA replication proteins [BR:
cnt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JT31_18185
DNA repair and recombination proteins [BR:
cnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JT31_18185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_4
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
ResIII
AAA_2
AAA_14
AAA_16
AAA_assoc_2
AAA_30
AAA_7
PIF1
nSTAND3
TsaE
Motif
Other DBs
NCBI-ProteinID:
AIR06470
UniProt:
A0A089RJ49
LinkDB
All DBs
Position
3853904..3855832
Genome browser
AA seq
642 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQQHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRHQLEHILGEEKVVSEPRALQLLARAADGSLRDALSLTDQAIASGDGQVTTSAVSTM
LGTLDDDQALSLIEAVVHADGQRVMALLNDAAARGVEWEALLVEMSALLHRVAMVQLSPS
ALGSDMAAIEQRMRELARVVPPADIQLYYQTLLIGRKELPWAPDRRMGVEMTLLRALAFH
PRKPLPEPEVPRQAASIPVINPASHQPAARQQQAAPPPDREAPPLPDATSQILQARSQLM
RHQETDKAKKNEPAAQRLARPAKSTALERLASVTERVQARPAPSVPEKPAKPEAYRWKSQ
NPIEAAPEPVATPKALKKALEHEKTPELAQKLAEEAIERDEWAAEINQLMLPKLVQQLAL
NAWKEADGNRVCLHLRPGQRHLNSPSAQKTLSDAMSTFHGEAIELTIIEDENLARRTPLE
WRQAIYEEKLAQARESMNSDSNIQTLQRFFDAELDEDSIRPV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagctaccaggtcttagcccgcaaatggcgcccacaaacttttgctgatgttgtcggc
cagcaacacgtactgaccgcgctggctaatggtttgtcgctgggccgcatccaccatgcg
taccttttttccggcacccgaggggtggggaaaacctcaatcgcccgtctgctggcgaaa
gggctgaattgcgaaaccggcattaccgcgaccccttgtggcgtctgcgataactgccgc
gaaatagaacaaggccgctttgtcgacctgattgagatagacgctgcctcgcgtaccaaa
gttgaagacacccgcgacctgctggacaacgttcagtacgcccccgcgcgtggccgcttt
aaggtctaccttatcgatgaagtgcacatgctctcgcgccacagcttcaacgcgctgctt
aagacgctggaagagcctcctccgcacgtaaaattcctgctggccaccaccgatccgcaa
aagctgccggtgacgattctttcccgttgcctgcagttccacctgaaagcgctggacgtc
gaacaaatccgccatcagctggaacacattcttggtgaggagaaggttgttagcgagccc
cgcgcgctgcagctgttagcccgggcggcagacggcagcctgcgtgatgcgctgagcctg
accgaccaggcgattgccagcggtgacggccaggtcacgacgtcggccgtcagcaccatg
cttggcacccttgatgatgaccaggcgctgtcgctgattgaagcggtggtgcatgccgac
gggcagcgcgtaatggcgttgctgaacgacgcggcggcacgtggcgttgagtgggaagca
ttgctggtggaaatgtccgcgctgctgcaccgcgtggcgatggtccagctttctccttcc
gcacttggcagcgatatggcggctatcgaacagcgtatgcgtgaacttgcgcgcgttgtc
ccacccgccgacatacagctttactaccagacattgctgattggccgcaaagagctgccg
tgggcgccggatcgccgcatgggcgtagaaatgacgctgctgcgtgcgctggccttccat
ccgcgcaaaccgctgcccgagccggaagtaccacgccaggcggcaagcattccggtgatt
aacccggcgtcgcatcagccagcagcaaggcagcagcaggcggctccgccgccggacagg
gaagcccctccgctgccggatgctaccagccagatccttcaggcgcgcagccagctgatg
cgccatcaggagactgacaaagcaaaaaagaatgagccggcagcgcaacgactagcgcgg
ccggcaaaaagcaccgcgctggaacgtttggcctcggtgaccgaacgcgttcaggcacgg
cctgcgccatcggtgccggaaaaaccggcgaagccagaagcctatcgctggaaatcacaa
aatccgattgaagcggcgcccgagccggttgcgacgccaaaggcgctgaaaaaagcgctc
gagcatgaaaaaacgccggaactagcgcagaagctggccgaagaggctatcgagcgcgac
gagtgggcggcggaaatcaatcagctgatgctgccaaaactggtgcaacagctggcgctc
aatgcctggaaagaggcggacggcaaccgggtttgcctgcatttgcgtccgggccagcgc
cacctgaattcgccctcggcgcaaaaaacgctctcagatgccatgagcacgttccatggc
gaggcgatagaactgactattattgaagatgagaatctggctcgccgcacgccgcttgag
tggcgtcaggccatctacgaagagaagctggcgcaggcgcgcgaatcgatgaacagcgac
agcaatattcagactctgcaaaggttctttgacgcagagctggatgaagatagtattcgc
cctgtttga
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