Cedecea neteri SSMD04: JT31_21610
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Entry
JT31_21610 CDS
T03298
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
cnt
Cedecea neteri SSMD04
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnt03000
]
JT31_21610
Transcription factors [BR:
cnt03000
]
Prokaryotic type
Helix-turn-helix
Other families
JT31_21610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
MarR
HTH_24
LigT_PEase
HTH_Tnp_ISL3
HTH_29
Penicillinase_R
HVO_A0261_N
TrmB
Motif
Other DBs
NCBI-ProteinID:
AIR07117
UniProt:
A0A089Q352
LinkDB
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Position
complement(4583270..4584139)
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AA seq
289 aa
AA seq
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MNMLEKIQSQLEHLSKSERKVAEVILATPQDAIHSSIATLARSADVSEPTVNRFCRRLET
KGFPDFKLHLAQSLANGTPYVNRNVDEDDSVESYTGKIFESAMAGLDRVRQSLDMSAVNR
AVDLLTQAKKIAFFGLGSSAAVAHDATNKFFRFNVPVIYSDDVVMQRMSCMNCTEQDVVV
LISHTGRTKNLVELAQLARENDAIVLAITSEGSPLAREATLSLLLDVPEDTDIYMPMVSR
LAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKQRHLSGDEH
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgctggaaaaaatccagtcacagctggaacaccttagcaaatcggaacgcaaa
gtcgcagaagtgattctcgccacacctcaggatgccattcactcaagcatcgccacgctc
gcccgcagtgcagacgtcagtgaacccacagtaaaccgcttctgccgccgcctggaaacc
aaaggcttcccggattttaaactgcatttagcccagagtctggcgaatggcacgccgtat
gtaaaccggaatgttgatgaagatgatagcgtcgagtcctacaccggtaagatatttgag
tccgcgatggcaggccttgacagggttcgccagtcgctggatatgtcagccgttaatcgc
gccgtcgatctgctgacccaggcaaagaaaatcgccttctttgggcttggatcttctgcc
gccgtcgcccacgacgccaccaataaattcttccgcttcaacgtaccggtaatttactca
gatgacgttgttatgcaacgtatgagctgtatgaattgtactgaacaggacgttgtggtg
ctgatatcccacaccgggcggactaaaaacctggtcgaactcgcccagctcgcccgtgaa
aacgatgccattgtgctcgccatcacctctgaggggagcccccttgcccgcgaggccacg
ctttcgctgctgcttgatgtgcctgaagacaccgatatctatatgccaatggtgtctcgc
ctcgcgcagttaaccgttattgacgtgctggcaacgggctttactttgcgcagaggggca
aaattcagggataacttgaagcgagtcaaggaagcgctcaaagaatcgcgctttgataaa
caacgccatctctcaggcgatgaacattaa
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