Cedecea neteri SSMD04: JT31_21660
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Entry
JT31_21660 CDS
T03298
Name
(GenBank) exodeoxyribonuclease X
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
cnt
Cedecea neteri SSMD04
Pathway
cnt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JT31_21660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnt03400
]
JT31_21660
DNA repair and recombination proteins [BR:
cnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JT31_21660
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
AIR07127
UniProt:
A0A089Q361
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All DBs
Position
complement(4594920..4595591)
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AA seq
223 aa
AA seq
DB search
MLRIIDTETCGLQGGVVEVASVDILDGQIVNPMSDLVRPDRPISHQAMAIHKITEEMVAD
KPWIEDVIPRYHGSRYYVAHNASFDSRMLPEMQGDWICTVKLARRLWPGIKYSNMGLYKS
LKLHVDTPAGLHHHRALFDCYITAALLLRIMDVSGWTPEEMVTITGRPALVTTMMFGKYR
GKPIAEIAEDDPGYLRWMLNNIKELTPDLRMTLKHYLAANAAD
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcattatagatacggaaacctgtggattgcagggtggcgtggtggaagtggcg
tcggtcgatatcctcgacggccagattgtgaacccgatgagcgaccttgttcgcccagac
cgcccgattagccatcaggcgatggccatccataaaattaccgaagagatggtggccgat
aaaccctggattgaagacgtgatcccccgctatcacggtagccgttattatgttgcgcac
aacgccagctttgatagccgcatgctgcctgaaatgcagggagactggatttgtaccgtg
aagctggcgcgtcgcctatggccgggcattaaatacagcaacatgggcctgtataagtcg
ctgaagctgcacgtggacacgcccgccgggctgcatcatcaccgagcgttgttcgactgc
tatatcaccgcagccctgttgttaagaattatggacgtgtccggctggacgccggaagaa
atggtcacgataaccggccgtccggcgctggtgaccactatgatgtttggtaaataccgc
ggtaagcctatcgcggaaatcgccgaagacgatccgggttatctgcgctggatgctcaac
aacatcaaggagctaacgccggatcttcgtatgaccttaaaacattatcttgccgccaac
gcggctgactag
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