Cedecea neteri SSMD04: JT31_22015
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Entry
JT31_22015 CDS
T03298
Symbol
yebU
Name
(GenBank) RNA methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
cnt
Cedecea neteri SSMD04
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cnt03009
]
JT31_22015 (yebU)
Enzymes [BR:
cnt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
JT31_22015 (yebU)
Ribosome biogenesis [BR:
cnt03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JT31_22015 (yebU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
RsmF-B_ferredox
Methyltransf_25
PCMT
FtsJ
Ubie_methyltran
TRM5-TYW2_MTfase
GCD14
Motif
Other DBs
NCBI-ProteinID:
AIR07188
UniProt:
A0A089Q4D0
LinkDB
All DBs
Position
complement(4641835..4643283)
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AA seq
482 aa
AA seq
DB search
MAQSTAVYLPQPFLDAIRDALPADQTLESFIEYCQLPLRRSLRVNTLKISVAEFLTLVAP
YHWRLTPVPWCEEGFWIERDDEETLPLGSTAEHLSGLFYIQEASSMLPVAALFADGNEPQ
RVMDVAAAPGSKTTQIAARMGNTGAILANEYSASRVKVLHANISRCGISNVALTHFDGRV
FGAALPESFDAILLDAPCSGEGVVRKDPDALRNWSPESTAEIANTQRELIESAFHALRPG
GTLIYSTCTLNRQENQEICQWLLDTWPDAVEIAPLDELFPEAARALTPEGFLHVFPQIYD
CEGFFVARLRKTASIEPLPAPGYKVGKFPFVPMKGKSAAEVTAAAEKSGLTWGDELRLWQ
RDKEIWLFPTEIEPLIGKVRFSRIGLKLAEQHNKGFRWQHEAVVALVKSDNSLCFPLSEA
EAEEWYRGRDIYPEVTPSRDEVVVTFQGQPLGLARKVGSRLKNSYPRELVRDGKLFAAPQ
AG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatctactgccgtttatcttccgcaacctttcctcgacgctattcgcgatgcg
cttcccgcagaccagacgctggaaagctttatcgaatactgccagctgccgctgcgccgc
agcctgcgcgtaaatacgctgaagatctccgtggccgagtttctcacgctcgtcgcccct
tatcactggcgcctgacgccggtgccgtggtgtgaagaaggtttctggattgagcgagat
gatgaagaaaccctgccgctgggcagtacggccgaacacctgagcggcctgttctacatt
caggaagccagctcgatgctgcccgtcgccgccctgtttgccgacggcaatgaaccgcag
cgcgtgatggacgtcgccgccgccccaggctcaaaaacgacccagatagccgctcgtatg
ggtaatactggcgcaattctggcgaacgaatactctgccagccgggtgaaagtcctgcac
gcaaacatcagccgttgcggtatcagcaacgtggcacttacccattttgacggccgcgta
tttggtgccgccctgccggaatccttcgacgccattctgctggatgcgccctgctcgggc
gaaggcgtggtgcgtaaagatccggacgccctgcgcaactggtcacctgaaagcacggct
gagatagccaatacccaacgtgaactgatcgaaagcgcttttcacgctctgcgcccaggc
ggcaccctgatctactcaacctgcacgcttaatcgccaggaaaatcaggaaatctgccag
tggctgctggatacctggccggacgcggtagaaattgcgcctctcgacgagcttttccct
gaagcagctcgcgcgctgacgccggaaggcttcctgcacgtcttcccgcagatttacgac
tgtgaaggctttttcgtcgcacgtttacgcaaaacggcctccatcgagccgcttccagct
cccggctataaagtgggaaaattccccttcgtgcctatgaagggaaaatcggcggcagaa
gtcaccgccgccgcggaaaaatcgggtcttacctggggcgatgaactccgtctgtggcag
cgtgataaagaaatctggctgttcccgaccgaaatagagccccttatcggcaaagttcgt
ttctcccgtattggcctgaagcttgccgaacagcacaacaaaggctttcgctggcagcat
gaagccgtggtcgcgttggtaaaaagtgacaactcgctttgtttcccgctgagcgaagca
gaggccgaagagtggtaccgtgggcgggatatctacccagaagtgacaccgtcacgtgat
gaggttgttgtcactttccaggggcaaccgcttggcctcgcgcgtaaagtcggctcacgc
ctgaagaacagctatccgagagagctggtccgtgacggcaagcttttcgccgcaccgcag
gctggctga
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