Cedecea neteri SSMD04: JT31_22895
Help
Entry
JT31_22895 CDS
T03298
Name
(GenBank) transcriptional regulator
KO
K03746
DNA-binding protein H-NS
Organism
cnt
Cedecea neteri SSMD04
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cnt03036
]
JT31_22895
03400 DNA repair and recombination proteins [BR:
cnt03400
]
JT31_22895
Chromosome and associated proteins [BR:
cnt03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
JT31_22895
DNA repair and recombination proteins [BR:
cnt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JT31_22895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
PaaX_C
DUF6626
TetR_C_24
STX6_10_61_N
Swi5
Motif
Other DBs
NCBI-ProteinID:
AIR07356
UniProt:
A0A089UGB4
LinkDB
All DBs
Position
complement(4824679..4825086)
Genome browser
AA seq
135 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEENAAAAEVEERTRKLQQ
YREMLIADGIDPNELLNSIAAVKSAGKAKRAARPAKYQYIDENGETKTWTGQGRTPAVIK
KAMDEQGKKLEDFLL
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcacttaaaattctgaacaacatccgtactcttcgtgcccaggcaagagaa
tgcaccctggaaactctggaagagatgctggaaaaattagaagttgtagttaacgaacgt
cgtgaagaagaaaacgcggcagccgctgaagttgaagagcgcactcgtaaactgcagcag
taccgtgaaatgctgattgctgacggtattgaccctaatgaactgctgaacagcattgct
gctgttaaatctgcaggtaaagcaaaacgcgcagcgcgtcctgctaaataccagtacatc
gacgaaaacggcgaaactaaaacctggaccggccagggtcgtacgccagcagttatcaag
aaagcaatggatgagcaaggtaagaagctggaagacttcctgctgtaa
DBGET
integrated database retrieval system