Campylobacter novaezeelandiae: CNZW441b_0540
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Entry
CNZW441b_0540 CDS
T07570
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cnv
Campylobacter novaezeelandiae
Pathway
cnv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cnv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CNZW441b_0540 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnv03021
]
CNZW441b_0540 (rpoC)
03400 DNA repair and recombination proteins [BR:
cnv03400
]
CNZW441b_0540 (rpoC)
Enzymes [BR:
cnv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CNZW441b_0540 (rpoC)
Transcription machinery [BR:
cnv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CNZW441b_0540 (rpoC)
DNA repair and recombination proteins [BR:
cnv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CNZW441b_0540 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QWU79872
LinkDB
All DBs
Position
514896..519452
Genome browser
AA seq
1518 aa
AA seq
DB search
MSKLKIIEIKEEARPRDFEAFQLRLASPEKIKSWSYGEVKKPETINYRTLKPERDGLFCA
KIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSRMGHIELVTPVAHIWYVNS
LPSRIGTLLGVKMKDLERVLYYEAYIVENPGDAYYDNENTKKVEFCDVLNEEQYQNLMQR
YENSGFKARMGGEVVRDLLANLDLVSLLNQLKEEMSATNSEAKKKTIIKRLKVVENFLNS
NLNANTDSEDAVPNRPEWMMITNLPVLPPDLRPLVALDGGKFAVSDVNDLYRRVINRNTR
LKKLMELDAPEIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRF
RQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPKKMALELFKPHLLAKLEEKGYATTVKQAK
KMIENKTNEVWECLEEVVEGHPVMLNRAPTLHKLSIQAFHPVLVEGKAIQLHPLVCAAFN
ADFDGDQMAVHVPLSQEAIAECKVLMLSSMNILLPASGKSVTVPSQDMVLGIYYLSLEKA
GAKGAHKICTGIDEVMMALESKSLDIHASIQTLVDGRKITTTAGRLIIKSILPDFVPEYS
WNKVLKKKDIAALVDYVYKQGGLEITASFLDKLKNLGFEYATKAGVSISIADIIVPKNKE
KAINEAKKQVREIQNSYNLGLITSGERYNKIIDIWKSTNNILSKEMMNLVEKDKDGFNSI
YMMADSGARGSAAQISQLAAMRGLMTKPDGSIIETPIISNFREGLNVLEYFISTHGARKG
LADTALKTANAGYLTRKLIDVAQNVKITIEDCGTHEGIEINEITADSSIIETLEERILGR
VLAEDVIDPITNSVLFAEGTLIDEEKAKILGESGIKSVNIRTPITCKAKKGICAKCYGVN
LGEGKLVRPGEAVGIISAQSIGEPGTQLTLRTFHSGGTASTDLQDRQVSAQKEGFIRFYN
LKTYKNKENKSIAANRRNAAILLVEPKIKAPFKGVINVENIHEDVVISVKNKKQEAKFIL
RKYDLAKPNELAGVSGNIDGKFYLPYQSGSEVEEDESIVEVIKEGWNIPNRIPFASDILV
KDGDPIVQNIKAGEKGTLKFYILKGDGLDRVKNVKKGDIVKEKGFFVVIADENDREAKRY
YIPRESKIEFDDSTFIEDPNTIIVSATKKDKNIIAEWDAYNHTTIAEIDGVVAFEDIEAG
YSADEQVDEATGKRSLVINEYLPSGVRPTLIIAGKGEKSVRYQLEPKTVILVSDGDKVAQ
ADILAKTPKAATKSKDITGGLPRVSELFEARKPKNSAVIAEIDGVVRFDKPLRSKERIII
QAEDGTSVEYLIDKSKHIQVRDGEFIHAGEKLTDGVISSHDVLKILGEKALHYYLISEIQ
QVYRGQGVVISDKHIEVIVSQMLRQVKIVDSGNTKFIEGDLVSRRKFRQENERIIKMGGE
PAIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVILGRMIP
VGTGLYHEQDFKLRENIE
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcttaaaattatagaaatcaaggaagaagcaagaccaagggattttgaggct
tttcaattaagacttgccagccctgaaaagattaaatcttggtcatatggagaagttaaa
aagcctgaaacaattaattatagaactttaaaaccagaaagagatggtcttttttgtgca
aaaattttcggtcctatacgtgattatgaatgtctttgtggtaaatataaaaagatgcgc
tttaagggtgtgaaatgtgaaaaatgtggagtagaggttgcaaattctaaggtgcgtcgt
tcaagaatggggcacatcgaacttgtaactccagtagctcatatttggtatgtaaattct
ttaccaagtcgtataggaactttgcttggcgttaagatgaaagatcttgagcgcgtgctt
tattatgaggcttatattgttgaaaatccaggtgatgcatattatgataacgaaaatacc
aaaaaagtagaattctgtgatgttttaaatgaagagcaatatcaaaatttaatgcaacgt
tatgagaatagcggctttaaagcgagaatgggtggtgaagtagttagagatttgcttgca
aatttagatcttgtttcgcttttaaatcaattaaaagaagaaatgagtgctacaaattct
gaagcaaagaaaaaaactattataaaacgcttaaaagtagtagaaaattttctaaattca
aatttaaatgctaatacagatagtgaagatgcagtgccaaatcgtccagaatggatgatg
attacaaatcttccagttttacctccagatttacgtcctttagtagctttagatggggga
aaatttgctgtttctgatgtaaatgatttatatcgtagagttattaatagaaacactcgt
ttaaaaaagcttatggagcttgatgcaccagaaatcattataagaaatgaaaagagaatg
cttcaagaagcagtagatgcactttttgataatggacgtcgtgccaatgccgtaaaaggt
gcaaataaacgtcctttaaaatctttaagtgagattatcaaaggaaaacaaggaagattc
agacagaatttacttggtaaaagagttgatttttctggtcgtagtgttattgttgtagga
ccaaaattaagaatggatcagtgtggtttacctaaaaaaatggctttagaactttttaaa
ccacatcttttagctaaattggaagaaaaaggttatgctacaacagttaaacaagctaaa
aaaatgatagaaaacaaaactaatgaagtttgggagtgcttggaagaagttgttgaggga
catcctgttatgcttaatcgtgcgccaactctacataagctttctatacaggcatttcac
cctgttttagttgaaggtaaggcaatacaacttcatcctctagtttgtgctgcgtttaat
gcagactttgatggggatcaaatggctgttcatgttcctttatctcaagaagctattgca
gagtgtaaagttcttatgctttcatcaatgaatattcttttgccagcaagtggtaaatct
gttactgttccttcgcaagatatggttttaggaatttattatctttctttggagaaagca
ggagcaaaaggggctcataaaatttgcacaggaattgatgaagtgatgatggctttagaa
tcaaaaagtcttgatattcacgctagcattcaaactcttgtagatggacgtaagattaca
acaacagcagggcgtttaattattaaatccattttacctgattttgttccagaatacagt
tggaataaagttttaaagaaaaaagatattgctgctcttgtagattatgtctataaacaa
ggtggtttagaaattacagcaagtttcttagataaattaaaaaatcttggttttgagtat
gctacaaaagctggggtttctatatctattgctgatattattgttccaaaaaataaagaa
aaagcaatcaatgaagctaaaaaacaagtaagagaaattcaaaattcttataatcttgga
cttatcacttcgggtgaaagatataataaaattatagatatttggaaaagtaccaataac
attctttcaaaagaaatgatgaatttagtagaaaaagataaagatggctttaactctatt
tatatgatggcagattctggagctagaggtagtgcagctcaaatttctcagcttgctgcc
atgagaggacttatgactaaaccagatggttctattatagaaacaccaattatttctaat
ttccgtgaaggattaaatgttcttgagtattttatatctacccatggagctagaaaaggg
cttgccgataccgcacttaaaacggcaaatgcaggttatttaacaagaaagcttatagat
gttgcacaaaatgtaaaaattactattgaagattgtggaactcacgaaggtatagaaatt
aatgaaattactgctgatagctctattatagagactttagaagaaagaattttaggaagg
gttttagctgaagatgtgattgaccctattacaaattcagttctttttgctgaaggcact
ttgattgatgaagagaaagctaaaattttaggagaaagcggaattaaaagtgtaaatatt
agaactcctataacttgtaaagctaaaaaaggaatttgtgctaaatgttatggcgtgaat
ttaggagaaggaaagcttgtaagacctggtgaagctgtgggaattatttctgctcagtct
attggagaacctggaactcagcttacacttagaactttccatagcggtggaacagcaagt
actgatttacaagatagacaagtaagtgctcaaaaagaaggttttataagattttacaat
cttaaaacttataaaaataaagaaaataaaagtattgcggcaaatcgtagaaatgcggct
attttgcttgttgagcctaaaataaaagctccatttaagggagttatcaatgtagagaat
atccacgaagatgttgttatttcggttaaaaataaaaagcaagaagccaaattcattttg
agaaaatatgatttagcaaaaccaaatgaattagctggtgtaagtggtaatatcgatggt
aaattctatttgccttatcaaagcggtagtgaagttgaagaagatgaaagcattgtagag
gttattaaagagggttggaatatcccaaatcgtattccttttgcaagtgatattttagta
aaagacggcgatcctatagttcaaaatattaaagcaggagaaaaaggaactttaaaattc
tatattttaaaaggagatggactcgatagagttaaaaatgtcaaaaaaggcgatatagtt
aaagaaaaaggcttttttgttgtaattgcagatgaaaatgatagagaggcaaaaagatat
tatatcccaagagaatcaaaaatagaatttgatgatagtacttttattgaagacccaaat
actataattgtaagtgcaaccaaaaaagataaaaatattattgcagaatgggatgcttat
aatcataccactatagcagaaatcgatggagttgttgcatttgaagatatagaagcgggc
tatagtgcagatgagcaagtagatgaagctaccggaaaaagatctttagtgattaatgaa
tatttaccaagcggagtaagaccgacattaatcatagcaggaaaaggagaaaaatctgtt
cgctatcagcttgagccaaaaacagttattttggttagtgatggtgataaagtagctcaa
gcagatattttagcaaaaactccaaaagcagctacaaaatcaaaagatattactggaggt
cttccaagagtttctgagctttttgaagctagaaaacctaaaaatagtgctgttatagca
gaaattgatggagttgtaagatttgacaagccattgcgttctaaagaaagaattattata
caagctgaagatggcactagtgtagaatatttgattgataaatcaaaacatattcaagta
agagatggagaatttatccatgcaggtgaaaaacttactgatggagttatttcaagtcat
gatgttcttaaaattttaggcgaaaaagctttacattattatttgatttctgagattcag
caagtttatcgcggacaaggtgttgtaatttcagataagcatatagaagttattgtatct
caaatgttaagacaggttaaaattgttgatagcggtaatactaaatttattgaaggagat
ttagtttcaagacgtaaatttagacaagaaaatgaaagaattattaaaatgggcggagag
ccggctatagctgaaccggttcttttaggggttacgcgagcagctattggaagtgatagc
gtcatatctgctgcatctttccaagaaacgactaaggttttgacagaagcaagtatagct
ggtaaatttgattatttagaggatttaaaagaaaatgtaattttaggtcgtatgattcct
gttggaaccggtttatatcatgagcaagatttcaaattaagagaaaatatcgaatag
DBGET
integrated database retrieval system
