Campylobacter novaezeelandiae: CNZW441b_1106
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Entry
CNZW441b_1106 CDS
T07570
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cnv
Campylobacter novaezeelandiae
Pathway
cnv03420
Nucleotide excision repair
cnv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CNZW441b_1106
03430 Mismatch repair
CNZW441b_1106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnv03400
]
CNZW441b_1106
Enzymes [BR:
cnv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CNZW441b_1106
DNA repair and recombination proteins [BR:
cnv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CNZW441b_1106
MMR (mismatch excision repair)
Other MMR factors
CNZW441b_1106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QWU80414
LinkDB
All DBs
Position
1087941..1090016
Genome browser
AA seq
691 aa
AA seq
DB search
MIFKDINQSQEKAIRHIDGPMLILAGAGSGKTKTITTRLAYLIDEVGIPAQNTLTLTFTN
KAANIMKIRALNLMKNSNNQNPLLCTFHKFGLLFLRMHIEKLGRKNNFIIIDTEDRKKII
KELIDEELNASNISNYISYLKNHSKNVEMVFNDLNLYKNDEEKFKKFEKLALCYKNYQNY
LLKNNFVDFDDLLMLSNEILESDHNFAKEQSELYRYITVDEYQDTNALQYQILKNLCLVH
ENICVVGDDDQSIYGWRGAKIENILNFQSQFKNVKLVKLEQNYRSVGNILNAANKLIKNN
DKRLGKELICTKDQGEQIKIDEAQDEKEESLKIAKHVKTLLQQGVDASEIAVLFRINALS
RALEEALNKEKIPFKLLSGIKFYERAEIKDIISYLRLLTNLNDDYSLKRIINRPRRNFGS
TSLKKLEDYAQKEKISLFEALNNLDQSDFFPKKTQKEIHLFLEHIKTLKECNNLKELIYQ
LEEKIKLKDFYQNQADSEDKISNIDEFYASLKDKIKEGYYENLDDILNEIALLSDQDDLS
EKSINIMSIHSSKGLEFDHVFIMGLEQGIFPLLNDTSDIEEERRLAYVAITRAKKYLYLS
FTHSRFHKGIRMPFKKSQFLEESCLNIKSSKKEHILQKKEVGFKKGDLIKHKIFGIGRII
DVQTSKNEQKLSINFGGITRNILSSFVEKVI
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgatttttaaagatataaatcaaagccaagaaaaagctataaggcacatagatggtcct
atgcttattttagcaggagcaggaagtggaaaaacaaaaactattacaacaagacttgct
tatttaatcgacgaagttggaattcctgcacaaaatactttaactctaacctttacaaat
aaagcggccaatattatgaaaattagggctttaaatttgatgaaaaattccaataaccaa
aatcctttattatgcacttttcataaatttggtcttttatttttaagaatgcatatagaa
aaattgggacgtaaaaataattttattattattgatactgaagatagaaaaaaaattatc
aaagaacttatagatgaagaattaaatgcttcaaatatttctaattacatttcatattta
aaaaaccattctaaaaatgtagaaatggtttttaatgatttaaacctttataaaaacgac
gaagaaaaatttaaaaaatttgaaaaattagctctttgctataaaaattatcaaaattat
cttttaaaaaataattttgtagattttgatgatttgttaatgttaagcaatgaaatttta
gaaagcgatcataattttgccaaagaacaaagtgagctttatcgctatatcacagtagat
gaataccaagataccaatgctttacaatatcaaattctaaaaaatctttgtttggtgcat
gaaaatatttgcgttgtaggcgatgatgatcaaagtatttatggatggcgtggtgcaaaa
atcgaaaatattttaaactttcaaagccaatttaaaaatgtaaaacttgttaaacttgaa
caaaattatagatcagtaggaaatatcttaaatgccgctaataaacttataaaaaacaat
gataaaagattaggtaaagaacttatttgcaccaaagatcaaggagagcaaattaagatt
gatgaggcacaagatgaaaaagaagaaagtcttaaaatagcaaaacatgtaaaaacatta
cttcaacaaggagttgatgctagcgaaattgctgttttatttcgtattaatgctctctct
cgtgccctagaagaagcactgaataaagaaaaaattccttttaaacttttaagtgggatt
aaattctatgaaagagcagagattaaagatatcatttcttatcttagacttttaactaat
cttaatgatgattattctctaaaacgcattataaatagacctagaagaaattttggttct
acaagcttaaaaaaattagaagattatgcacaaaaagaaaaaatttcattatttgaagct
cttaataatcttgatcaaagtgatttttttccaaaaaaaactcaaaaagaaattcatctt
tttttagaacacataaaaaccttaaaagaatgtaacaatttaaaagaacttatatatcaa
ctagaagaaaaaatcaaattaaaagatttttatcaaaatcaagcagattctgaagataaa
atttctaatattgatgaattttatgcaagtcttaaggataaaattaaagaaggatattat
gaaaatttagatgatattttaaatgaaatcgcactcttaagcgatcaagatgatttaagt
gaaaaaagtattaatattatgagcattcactcaagtaagggacttgaatttgatcatgtt
tttattatggggttggaacaaggcatttttccactgcttaatgatacaagtgatattgaa
gaagaaagacgcttagcctatgttgctatcacaagagctaagaaatatctctatcttagt
tttacacattcaagatttcataagggtataagaatgccctttaaaaaaagtcaatttctt
gaagaaagttgcttaaatataaaatcttcaaaaaaagagcatattttgcaaaaaaaagaa
gtaggatttaaaaaaggggatttaatcaaacataaaatttttggtataggaaggataatt
gatgttcaaacaagtaaaaatgaacaaaaactcagcattaattttggcggtatcacacgt
aatattttatcttcctttgtggaaaaagtaatatga
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