Campylobacter novaezeelandiae: CNZW441b_1182
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Entry
CNZW441b_1182 CDS
T07570
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cnv
Campylobacter novaezeelandiae
Pathway
cnv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cnv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNZW441b_1182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnv03019
]
CNZW441b_1182
Messenger RNA biogenesis [BR:
cnv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CNZW441b_1182
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
KH_PNO1_2nd
KH_KhpA-B
KH_2
dUTPase
CBP_BcsF
ClpS
LMBR1
Motif
Other DBs
NCBI-ProteinID:
QWU80484
LinkDB
All DBs
Position
1161475..1163025
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AA seq
516 aa
AA seq
DB search
MITIIVVFTTLIGLGLGYLVAKKINEAKHEIFIEQAKAKAKAIEYEAELILKDAKNSILN
AELEIKKKYEDKAHKLQQELQCKFEEIHKKEQQIKLEAEKIKKDEEELNKNQKIIEDLHH
DSIRLKNQYQHKIDEVINILENSSGLTKDEAKKIILEKVEEKSRNEIAHIVRKYEEEAKN
EAKRKANYIIAQATSRFAGEFAAERLINVVNIKNDELKGRIIGKEGRNVKSLEMVLGVDI
IIDDTPGAIIISCFNLYRRAIATKVIELLVEDGRIQPARIEEIHEKVCKEFENSILEEGQ
IIAMDLGLDKLHPEIIKLIGKLKYRASYGQNALAHSLEVAHLAGIIAAECGGDEKLAKRA
GILHDIGKALTHDFEGSHVDLGAELCKRYKEHPVVINAIYAHHGHEEATSIEAAAVCTAD
TLSAARPGARREVLEAFLKRVRELEEIAKNKEGIKNAYAINAGREIRVIANAKLINDDQA
VLLAKEIANEIKDKLQYPGEIKVNVIRELRAIEYAR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgataacaataattgtagtttttacaaccttaataggacttggattaggatatttagtt
gctaaaaaaataaatgaagccaaacacgaaatttttatagaacaagcaaaagcaaaagca
aaagctattgaatatgaagctgagcttatattaaaagatgccaaaaattctatactaaat
gctgaattagaaatcaaaaaaaaatatgaagataaagctcataaattacaacaagaatta
caatgtaagtttgaagaaattcacaaaaaagaacagcaaattaaactagaagctgaaaaa
ataaaaaaagatgaagaagaattaaataaaaatcaaaaaattatagaagatcttcatcat
gatagcataagattaaaaaaccaatatcaacataaaatcgatgaagtgattaatatttta
gaaaattcatctggccttacaaaagatgaagctaaaaaaattattttagaaaaagttgaa
gaaaaatcacgcaacgaaatagctcatatagtaagaaaatatgaagaagaggctaaaaat
gaagctaaaagaaaagcaaattacatcatagcccaagccacttcacgttttgctggagaa
tttgctgcagaaaggcttattaatgtagtcaatattaaaaatgatgaacttaaagggcgc
attataggcaaagaaggacgcaatgttaaaagcttagaaatggttttaggtgttgatatt
attatagatgataccccaggtgctattataattagttgttttaatctttatcgtcgtgcc
attgctacaaaagtcatagagcttttggttgaggatgggagaattcaaccagctcgtatt
gaagaaattcatgaaaaagtttgtaaagaatttgaaaattccattttagaagaaggacaa
atcatagctatggatttaggtcttgataaacttcaccctgaaatcataaaactcattggc
aagttaaaatatcgtgctagttatggtcaaaatgccctagcacattctttagaagttgca
catcttgcaggaattattgcagctgagtgtggtggagacgaaaaactagccaaacgtgca
ggaattttacacgatataggaaaagcacttacgcatgattttgaaggatctcatgttgat
ttgggagctgaactttgtaaacgctacaaagagcatcctgttgtaattaatgccatttat
gcacatcatggtcacgaagaagccacgagtatagaagcggctgcagtttgtactgctgat
actttaagtgctgcaagacctggtgcaagaagagaagttttagaggcctttttaaaaaga
gtaagggaacttgaagaaatagcaaaaaacaaagaaggaattaaaaatgcctatgctatc
aatgcaggaagagaaattagggttatagctaatgcaaaattaattaacgatgatcaagct
gtacttttagctaaagaaattgctaatgaaattaaagacaaactccaatatcctggcgaa
atcaaagtcaatgttatacgcgaactaagagcaattgaatatgcgaggtaa
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