Campylobacter novaezeelandiae: CNZW441b_1201
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Entry
CNZW441b_1201 CDS
T07570
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cnv
Campylobacter novaezeelandiae
Pathway
cnv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cnv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNZW441b_1201 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnv03019
]
CNZW441b_1201 (pnp)
03016 Transfer RNA biogenesis [BR:
cnv03016
]
CNZW441b_1201 (pnp)
Enzymes [BR:
cnv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CNZW441b_1201 (pnp)
Messenger RNA biogenesis [BR:
cnv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CNZW441b_1201 (pnp)
Transfer RNA biogenesis [BR:
cnv03016
]
Prokaryotic type
tRNA degradation factors
CNZW441b_1201 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
S1CSD-TOTE-1
DUF3870
S1_RRP5
Rep_fac_C
CsrA
Porphyrn_cat_1
Motif
Other DBs
NCBI-ProteinID:
QWU80503
LinkDB
All DBs
Position
1182558..1184717
Genome browser
AA seq
719 aa
AA seq
DB search
MFNSFLKKITNTFFGEKGNKMQYNIQINKNLETFYIDKVARQALGSVLLQVGKSVVLATI
AKEDKKVEEDFLPLTVQYIEKAYAAGKIPGGYVKRETKPSDIETLNARIIDRSLRPLFPK
GYLYPTQITVMILSADCETDLQVISLNAASIALYISGIPIKAPVCGVRIAKINEEFILNP
NNQELQKSSLDLYVSGVKDELLMIEMRALPSKDNDTQKMNELSEDETIKALEMAQQAIYE
ASCIYEKTFAKHKKEIDIELKEQIENNELFEFIEKNYLNDIKNAINQMAKSERASELDKI
SQKILNFHSNEGWSQEEILNTLFLIKRKIIREQIIYERKRADGRALNEVRPIDIETNILP
NAHGSCLFTRGQTQALVVATLGNDNDAQMIDLLTEKNPINERFMVNYNFPGFSVGEASPI
KAPGRRELGHGNLAKRALYPSIDEDYPYVIRLVSEILESNGSSSMASVCGGSLALRAAGV
QSIDLIAGVAMGLIFEKDKYAILTDIMGLEDHDGDMDFKVAGNKDGITALQMDIKLGGIN
KEILKEALMQAKEARIHILNIMQKANENIIVNEEILPKLELFKIDPSKIVDIIGQGGKTI
KEIVEKFDVCIDIDREKGEIKIASNNNECIKLAKEYILNITKGKKKETLKDISEFELHQE
FTGIVKKVTSFGAFIELKNGIDGLLHSSKIKSTLNIGDEIKVKINEIKNGKISVDLANE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
ttgtttaattcatttttaaaaaaaataacaaatactttttttggagaaaaaggaaataaa
atgcaatacaacatacaaattaataaaaatttagaaactttttatattgacaaagtagct
agacaagctctaggttctgtcttacttcaagttggaaaaagcgttgttttagcaactatt
gcaaaagaggataaaaaagttgaagaagattttctacccttaaccgttcaatatatagaa
aaagcatatgctgcaggtaaaattccaggcggatatgtaaaaagagaaactaagccaagc
gatatagaaaccttaaatgcaagaattattgatagaagtttaagaccattatttccaaaa
ggttatctttatcctacacaaattactgtaatgatactttcagctgattgtgaaacagat
ttacaggtaataagtttaaatgctgcaagtattgctctttatataagcggaattcctatt
aaagctccagtgtgcggggtgcgtattgcaaaaattaatgaagaatttattcttaatcca
aacaatcaagaacttcaaaaaagctctttagatctttatgtatctggggtaaaagatgaa
cttttaatgatagaaatgagagccttgccaagtaaggataatgatactcaaaaaatgaat
gaattaagcgaagatgagacaatcaaagctttagagatggctcaacaagcaatttatgaa
gcatcttgtatttatgaaaaaactttcgctaaacataaaaaagaaattgatattgaacta
aaagaacaaatagaaaataatgaactttttgaatttatagaaaaaaattatctaaatgat
atcaaaaatgctatcaatcaaatggcaaaaagtgaacgagcaagcgaacttgataaaatt
tctcaaaaaatcctaaattttcattctaacgaaggatggagtcaagaagaaattttaaat
actctatttttaattaaaagaaaaattataagagaacaaattatttatgaaagaaaaaga
gctgatggaagagctttaaatgaagtacgccctatcgatatagaaacaaatattttacca
aatgcacacggatcttgcctttttacaagaggccaaactcaagcacttgtagtagctact
ttaggcaatgacaatgatgcgcaaatgatagacttgctcacagaaaaaaatcctatcaat
gaacgctttatggttaattataattttccaggatttagcgttggtgaagcaagtcctata
aaagcacctggaagacgagaattaggccatggaaatttagctaaaagagctctttatcca
agtattgatgaagattatccttatgtaattcgtttagtaagtgaaattttagaaagcaat
ggttcaagttctatggcttcagtatgtggaggatctttggctttaagagctgctggagta
caaagcattgaccttatagcaggtgttgctatgggacttatttttgaaaaagacaaatac
gctatattaaccgatattatgggtttagaagatcacgatggggatatggactttaaagta
gctggaaataaagatggtattactgctttgcaaatggatataaaacttggtggcataaat
aaagaaatattaaaagaagctcttatgcaagcaaaagaagcaagaattcatattcttaat
atcatgcaaaaagctaatgaaaatattatagtcaatgaagaaattttgccaaaattagaa
ttatttaaaatcgatccttcaaaaattgttgatattataggacaaggtggaaaaacaatt
aaagaaattgttgaaaaatttgatgtttgtattgatattgatagagaaaaaggtgaaata
aaaattgcaagtaataataatgaatgtataaaattagccaaagaatacattttaaatatc
actaaaggaaagaaaaaagaaaccctaaaagatatttcagaatttgaacttcatcaggaa
tttacaggtattgtaaaaaaagttacctcttttggtgcttttattgaacttaaaaatggc
atagatggattgcttcatagctctaaaatcaaaagcacactcaatattggagatgaaata
aaagttaagattaatgaaattaaaaatggaaaaatttctgtagatttagcaaatgaatga
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