Corynebacterium sp. ATCC 6931: DR71_1128
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Entry
DR71_1128 CDS
T03283
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
coa
Corynebacterium sp. ATCC 6931
Brite
KEGG Orthology (KO) [BR:
coa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
coa03019
]
DR71_1128 (hrpB)
Enzymes [BR:
coa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DR71_1128 (hrpB)
Messenger RNA biogenesis [BR:
coa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DR71_1128 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_11
AAA_30
Helicase_RecD
ResIII
AAA_22
AAA_19
AAA_16
ParA
AAA
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
AIN82112
UniProt:
A0A088QFB6
LinkDB
All DBs
Position
complement(1277144..1279561)
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AA seq
805 aa
AA seq
DB search
MSTDFQFNLQNISAGLPFASQLASLADAVRDHDVVVQAPPGTGKTTLVPPAVANTLGGRI
VVTAPRRVAVRSAARRLAQLSGTKLGGEVGYSVRGDAKVSRATRVEFVTPGVLLRRLLRD
GDVDASAVLIDEVHERGLDTDLVLAMVRDLRDIRDDLRLVAMSATVDAPKFAALLGGSTP
APIVAAEAAIHPLDIRYSPFPQRLDARGVTDDFLQHVAAQTRTMVEEAAGDVLVFLPGIR
EVERCAGYIADASDATVLTLHGQQSSEEQDRVFRRQADGRRVIVSTAIAESSVTVPGVRA
VVDACLTRGPRLDIARGFSGLVTSSCAQSSANQRAGRAGREGPGIVVRCVSQSEFASFPA
WPAPEIEVADLTQALLDAAAWGTPGMQGLKLLDAPPPHHTEAANRILAGLGAVDETGDIT
ELGRTLATLPVHPRMGRALLTATAMMPEHAGAVARAVEKLTDARGLAKQVRRIELDTEAP
ANLLSSDIPALVTALAWPDFIGRRRSVNSDEYLFTGGTAAELARGSDLHGHEWIAAADIS
RLSHGRALIRDGEAIDMEIAMLAAGHLVRTETTARVEQGRVRARERDLLGAIELSSRQVS
PTPEQCIAANSAWLAGTLADASPNLDRDTEQLRRRMAFLHTHRGAPWPDVSPAGLAAQAE
LLFAGELDRPTPPTLDAEHLRRLLPWPEATDFDRLVPERLEVPSGSKIRLEYPEDPTDEE
AQIVLAVKLQECFGLAETPQVLEKPVTMHLLSPAQRPLAVTGDLESFWNGAYAQVRSEMR
GRYPKHPWPENPWEEQATARTKRRR
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgatttccagttcaatttgcagaacatttctgcaggcctgccgttcgcgtcg
cagctcgcctcgcttgccgatgccgtgcgcgaccacgacgtagtagtccaggccccaccg
ggtaccggcaagaccactttggttccaccggcggtggccaacaccctaggcggacgcatt
gtagtcacggctccccggcgcgtggcggtgcgctcggcggcgcggcggttggcccaactg
tcgggcacgaagctcggtggggaagttggttactcggtgcgtggcgacgccaaagtctcc
cgcgccacccgcgtggagtttgtcactcccggtgtgctgctgcgtcgactgctgcgcgac
ggcgacgtggatgccagcgcggtgctcatcgacgaggtgcacgagcgcggcttggacacc
gacctggtgttggcgatggtgcgcgacttgcgggatatccgcgatgacctgcgccttgtc
gctatgtctgcgacggtggacgcaccgaagttcgcggccttgctcggtggctccaccccg
gctcccattgtggcggcggaggcggcaatccacccgctggatattcgctactcgcccttc
ccacagcggctggatgcgcgcggtgtgaccgacgatttcctgcagcacgtggcagcgcag
accaggacaatggtggaggaagccgccggtgatgtgctggttttcctccccgggatccgc
gaggtggaacgctgcgcaggctatatcgccgacgcctcagatgcgacagtgctaacgctg
catggccagcagagctccgaagagcaggaccgcgtgttccgtcgacaagcggacggtagg
cgcgtgattgtgtccaccgcgattgcggaatcatccgtgaccgtgccgggcgtgcgcgcc
gttgtcgacgcctgcctcacgcgcgggccgcgactcgacatcgcgcgtggcttctccggc
ctggtcaccagctcgtgtgcgcagtcctccgcgaaccagcgcgcgggccgtgcgggacgt
gagggcccgggcatcgtggtgcgctgcgtctctcagtcggagttcgcgtcctttcccgcc
tggcccgcgccggaaatcgaggtcgccgacctgacccaagcgctcctcgacgccgccgcg
tggggcacgccagggatgcagggactcaagcttctcgacgccccaccaccccaccacacg
gaggctgcaaaccgcattctcgctggcctgggtgctgttgatgagaccggtgacatcacg
gagctcggacgcaccctggctaccctgccggtgcatccacgcatgggacgcgcgctgctg
accgccacggccatgatgccggagcacgccggcgcggtcgcacgcgcggtggagaaactc
accgatgcccgcggcttggccaagcaggtgcgccgcattgagctggatactgaagccccc
gccaacctgctgtcctcggacatccccgcgctggtcacggccctggcctggccggatttc
atcgggcgacggcgcagtgtgaactccgacgagtacctcttcaccggcggcaccgcagcg
gaactcgcccgcggttctgacttgcacggccacgagtggatcgcggccgccgacatctcg
cggctctcccacggtcgtgcgctaatccgcgacggcgaggcaatcgacatggaaatcgcc
atgctcgccgccggccacctcgtccgcacggagaccacggcgcgcgtcgaacagggccgc
gttcgcgcccgtgagcgcgacctgctcggcgccatcgagctgtcctcccgccaggtctcc
ccgacgcccgagcagtgcattgccgccaactccgcctggcttgccggcacgcttgccgac
gccagccccaacctcgaccgcgacaccgaacagctccgccgccgcatggcctttctccac
actcatcgcggtgccccatggccggatgtctcccccgcagggcttgcggcccaggccgag
ctcctcttcgctggcgagctggaccgcccgacccctccgactttggatgccgagcatctc
cgccgcctgctgccctggccggaggccacggacttcgaccggctggtacccgaacgcctg
gaggtcccatccggttcgaagattcgcctggagtacccggaggaccccaccgacgaagag
gcgcagattgtcctggctgtgaagttgcaggagtgctttggcctggcggagaccccgcag
gtattggaaaagccggtgacaatgcatttgctgtcaccggctcagcgaccactcgcggtc
actggagacttggaaagtttctggaatggcgcctacgcacaggttcgctccgagatgcgg
ggccgttaccccaagcatccgtggccggagaacccgtgggaggagcaggctactgcgaga
acgaagcgccgtcgttaa
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