Corynebacterium sp. ATCC 6931: DR71_1717
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Entry
DR71_1717 CDS
T03283
Name
(GenBank) ribonuclease, Rne/Rng family domain protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
coa
Corynebacterium sp. ATCC 6931
Pathway
coa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
coa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DR71_1717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
coa03019
]
DR71_1717
03009 Ribosome biogenesis [BR:
coa03009
]
DR71_1717
Enzymes [BR:
coa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
DR71_1717
Messenger RNA biogenesis [BR:
coa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DR71_1717
Ribosome biogenesis [BR:
coa03009
]
Prokaryotic type
rRNA processing factors
DR71_1717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AIN82548
LinkDB
All DBs
Position
1931204..1935277
Genome browser
AA seq
1357 aa
AA seq
DB search
MANFSQDVVAKAREFDRESAALKTRVHHLAKSLGLTSKETIEALGHAGIVVKSAASTINQ
NQLDAVLNFIGDHPEGASLNDGSAATKQTGEESAAKEKQSAGKPNAADEKSDEQTAAKSE
KKSAAKKSSKKSAAKKATKKADQKDAPKAEKKADQKAAQSEAESDAAPAEEVTEKKDAKK
ASAKKSSAKQSAEKQTEEKQSDEKKSTTKKRATRKRAVKKTAGAPEETAAKDEQKDSNSV
VEEAVEAVVQSSSKKAADKNTADTVAETAEKTSAEKASAEAPAAKSAAVTTRRGRRVRRA
VRTTSAPVAEGTRETQEAQGPQDTQATQGEALQDIEPPIVPEPPVAEEQTAFAPIFLAPQ
AVPATAKNSATEDAASADSGASNQDSDDNAGEGQDGSSSSETERQPRPRRRRRGRGRRND
DAQQAEKTTENAEREEAETREEVEEPQAIKGSTRLEAQRRRRIERREESRKRHVISEAEF
LARRESVERTMVVRERKRHDHAGIVTEVGVLEDDLLVEHFVTSDTQTTQIGNIYLGRVQN
VLPSMEAAFIDIGTDRNGVIYVGDLNWKLLGTKSRSRKIEHALKAGDQILVQVSKDPIGH
KGARLTTHISMAGRFLVYVPGGRSAGISRKLPEPERKRLKSILSEVTPEGSGTIIRTAAE
GVSKEAIEADIKRLESQWQEIWEASEAAKAKRGAKPIALYEEPDMLVKVVRDVFNEDFSR
LVVEGDRPWNTVTDYIGDLAPELEPRLQRYFAKEHGDADVFEHFRIDEQLAKALDRKVWL
PSGGTLVIDRTEAMTVIDVNTGKFTGAGGNLEETVTRNNLEAAEEIVRQMRLRDLGGMIV
VDFIDMVLPENQDLVLRRLKEALGRDRSRHEVSEVTSLGLVQMTRKRLGTGLLETFSTPC
SCCNGRGLIIHIDPVEQDNQSRGHKNGRRNEEQGKSKRRNKSRSEHNPANHPAALAMHRD
QGDQAGTSKTTLDDDTETNQRDKEAADKRVAAAVEAVIVSSGNDEPKPPRRRRVRKSQGR
NDEQRQDGNGRQERRERDEQSDNSNDLAALAAAAVAEARAKDPEEPSDDRYMPQEGQRRR
RRATRRRVAEHVAVDSAARDADDRDEEHGDRRKRSERPTRAERAERTDNGGTGGGRGDAE
RSSSASARRRRRRAVRRTAVNETTAPQAESQAASTTDVREPAEDDKGGNANKTAKAVATE
SQTYEEAKEAFERSPRRRRPTRGNSRSDRAPRREDFESTKPKADAEGSKGGDRAKDNHDD
SNRSANRSGGGRRSGKSRVEVVAVQGTGARRNRRRAVRRVSSQSDAGATAPKQRQGTSNR
ATKPEQKQANRGAAATQKKPANRRRRVRRAVRRSGRN
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaatttcagccaggatgttgtcgctaaggcacgcgaatttgatcgcgagtcggcg
gctctgaaaacccgagtccaccacctggccaagagcttggggttgacctcgaaggaaacc
atcgaagctctgggacacgcggggattgttgtaaagtccgctgcgtccaccattaatcaa
aatcagctcgacgcggtgctgaatttcatcggcgatcatccagagggtgcctcgcttaac
gacggatccgctgcgaccaagcaaaccggcgaagagtcggccgcgaaggaaaaacagtcg
gcaggtaagccgaacgcggcggatgagaagtcggacgagcaaaccgcagctaagtccgag
aagaaatcagctgctaagaagagcagcaagaagtcggctgcgaagaaggccacaaagaag
gccgaccagaaggatgcgccgaaggcagaaaagaaggccgaccagaaggcagctcagagc
gaagcggagtcggacgcagcgcctgctgaggaagtgaccgagaagaaggacgccaagaag
gcctcggctaaaaaatcctcggcaaagcagagcgcagagaagcagactgaagagaagcag
agcgacgagaagaagagcacgactaagaagcgggcaacgcgtaagcgggctgtgaagaag
accgctggagctccggaagaaaccgcagcgaaggacgagcagaaggactcgaactcggtc
gtcgaggaagcggttgaggctgtagttcagtcgtcatcgaagaaggctgcagataagaat
actgccgacaccgtagccgagaccgctgagaaaacttccgctgagaaagcgtccgccgaa
gcacctgctgcaaagagcgctgcagtgaccacacgtcgtggtcgccgagttcgccgtgcg
gtccgcacgaccagcgctccagtggcagaggggactcgggaaactcaggaagcgcaagga
ccgcaggatacacaggcaactcagggcgaagccctgcaggacatcgagccgccgatagtc
ccggagccgccggttgcggaagagcagaccgcgtttgcgcctatcttcctggctccgcag
gctgtgccggccacggccaagaattcggccaccgaggatgcagcttcggctgacagcggt
gcctccaaccaggattccgatgacaacgcgggggaggggcaggacggctcgtcgtcaagc
gaaacggagcgtcagccgcggccgcgccgtcgccgtcgtggacgtgggcgtcgtaatgat
gatgctcagcaggcggagaagaccaccgaaaacgcagagcgcgaggaggcggaaacccgc
gaggaggtcgaagagccacaggcgattaagggctcgactcgcctggaggcgcagcgccgt
cgccgtatcgaacgtcgtgaggaatcgcgcaagcgccacgtgatctcggaggctgagttc
ctggctcgccgtgagtcggtggagcgcacgatggtggtgcgtgagcgcaagcgccatgac
cacgcgggcattgtcactgaggtgggtgtgctggaagatgacctgttggtcgagcacttc
gttacctctgacacgcagactacgcagatcggcaatatctacctcggtcgcgtgcagaac
gtcctacccagcatggaagcggcgttcattgatatcggaaccgaccgcaacggtgtcatt
tacgtaggtgacctgaactggaagctgctgggcacgaaatcgcgttcgcgcaagattgaa
cacgcgctgaaggccggcgaccagattctggtccaggtgtccaaggatccgattggtcac
aagggcgcgcgtctgaccactcacatttcgatggctggtcgattcctggtgtacgtgccg
ggcggccgaagcgcgggtatttcccgcaagctgccggagccggagcgcaagcgcctgaag
tcgattctgagtgaggttacgccggagggctcgggcacgattattcgcaccgcggccgag
ggcgtgtccaaggaggccatcgaggccgacattaagcgcctggaatcgcagtggcaggaa
atctgggaagcctccgaggcggcgaaggcgaagcgcggggcaaagccgattgcgctgtac
gaagagccggacatgctggtcaaggtcgtccgcgacgtcttcaacgaggacttctcgcgt
cttgtggtggagggcgaccgtccgtggaacacagtgacggactacatcggcgacctggca
ccggagctggagccgcgtctgcagcgctacttcgccaaggagcacggcgacgctgacgtc
ttcgagcacttccgcatcgatgagcagctggccaaggcactcgaccgcaaggtctggctg
ccttcgggcggcacgctggtcatcgaccgcaccgaggccatgacggtcatcgacgtcaac
accggtaagttcaccggtgctggcggaaacctggaagagacggtcactcgcaacaacctg
gaggccgctgaggaaatcgtccgccagatgcgtctgcgcgatctgggcggcatgattgtc
gtcgacttcatcgacatggtgctgccggagaaccaggacttggtgctgcgccgtctgaag
gaggcgctcggccgcgaccgctcgcgtcacgaggtctccgaggtcacctcgctcggcctc
gtccagatgacgcgcaagcgtctgggcacaggcctgctggagaccttctccacgccgtgt
agctgctgtaatggccgtggtctgattatccacatcgacccggtcgagcaggacaatcag
agccgtggtcacaagaacggtcgccgcaacgaagagcagggtaagtccaagcgccgcaac
aagtcgcgctcggagcacaatccggccaaccacccggcggcgctggccatgcaccgcgat
cagggcgaccaggcaggcacttccaagacaacgcttgacgacgacacggaaaccaaccag
cgcgataaggaggcagccgacaagcgagttgcagctgctgtcgaagctgtcatcgtctct
tctgggaacgatgagccgaagccaccgcgtcgtcgccgggttcgtaagagccagggccga
aacgatgagcagcgacaggacggcaatggccgtcaggagcgccgcgagcgtgatgagcaa
tcggacaactccaatgatctggctgctctggctgccgcagctgttgcggaagcccgtgcg
aaggatccggaagagccatcggatgaccgttacatgccgcaggagggacagcgccgccgc
cgtcgggctacgcgtcgccgggtagcggagcatgtcgccgttgattcggctgcacgcgac
gctgatgaccgcgacgaagaacatggcgatcgccgcaagcgttcggagcgcccgactcgt
gctgagcgtgccgagcgtaccgataacggtggcaccggtggaggccgtggcgacgctgaa
cgctccagcagcgccagtgctcgacgtcgccgtcgtcgcgctgttcgccgtacggctgtg
aatgagaccactgcgcctcaggccgagtcccaggcagcttccaccacagatgtgcgggag
ccagccgaggatgacaagggcggcaacgctaacaagaccgccaaggctgtggccacggag
tcccagacctatgaggaggccaaggaggcgttcgagcgttccccacgtcgtcgtcgtccg
actcgcggtaactcccgctcggatcgcgcaccgcgtcgcgaggacttcgagtccactaag
ccaaaggcggacgctgaaggcagcaagggcggagatcgtgcaaaagacaaccacgatgac
agcaaccgcagcgccaaccgcagtggcggtggccgtcgctcgggcaagtcgcgggttgaa
gtggtagcggtccagggcacgggagctcgccgtaatcgccgtcgggcggtgcgcagggtc
tcgtcgcaaagcgatgctggagcgactgcgccgaagcagcgacagggcacttcaaaccgc
gccactaagccagagcagaagcaggctaatcgcggtgctgcggcgacgcagaagaaaccg
gccaatcgtcgccgccgagtgcgtcgtgcggtgcgccgaagcggccggaactaa
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