Corynebacterium sp. ATCC 6931: DR71_1843
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Entry
DR71_1843 CDS
T03283
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
coa
Corynebacterium sp. ATCC 6931
Pathway
coa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
coa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DR71_1843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
coa03019
]
DR71_1843
03009 Ribosome biogenesis [BR:
coa03009
]
DR71_1843
Enzymes [BR:
coa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DR71_1843
Messenger RNA biogenesis [BR:
coa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DR71_1843
Ribosome biogenesis [BR:
coa03009
]
Prokaryotic type
rRNA helicases
DR71_1843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
Cas3-like_C_2
Transketolase_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIN81546
UniProt:
A0A088QUY8
LinkDB
All DBs
Position
2075969..2078002
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AA seq
677 aa
AA seq
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MAGEKAAEEKTEKVEKTAEAEKKAEKNKHDNDDDTVGFDELELPDDIVNAVRKVGFETPS
PIQAATIPTLMSGRDVVGLAQTGTGKTAAFALPILARIDRSVRAPQALVLAPTRELALQV
ADSFQSFADHLGKIQVLPIYGGQSYGVQLSGLRRGAQIIVGTPGRVIDHLEKGSLDISDL
RFLVLDEADEMLQMGFQEDVERILADTPDDKQVALFSATMPASIRRLSKQYLREPEEITV
KSQTRTADNIRQRFLMVSHRNKLDAVTRILEVEEFEAMIMFVRTKHETEELAEKLRARGF
SAAAINGDIPQTLRERTIDQLKDGRLDILVATDVAARGLDVDRISHVVNYDIPHDTESYV
HRIGRTGRAGRSGEALLFVTPREGRLLRSIERATKSQLHEMKLPTVDEVNDSRKQKFADD
LTEALADSQVPVFRELIEEYAEEHDTPLVDIAAAIAAQAQSGDFLMKEPPRGRRHDRDRD
RFDRDRNRGRDGRSRGERGQGKRADLVEFEREGTATYRISVGRRQHVRPGAIVGAIANEG
GLSSKDFGHIDIRGDHTLVELPANLPQEVINNLSDTRISGQLIGLKLDDGTSVDDSDDYR
GGRGGYRGNRRDGGRGRGGYRGGRGRDDRRGGGRGRGSYRGNFDDGDGFGGRGRGRGRSG
YRGDRDDRRGGYRGGRR
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
gtggccggagagaaggccgctgaggaaaagaccgagaaggtagaaaagactgccgaggcc
gaaaagaaggccgaaaagaacaaacacgacaacgatgacgacaccgtcggcttcgatgag
ctcgagctgccggatgacattgtcaatgcagttcgcaaggttgggtttgagactccttcc
ccaattcaggctgcaactatcccgactctgatgagcggccgcgacgtcgtcggcctggct
cagactggtactggtaagaccgcggcgttcgcgctgccgattctggctcgcattgatcgc
tccgtccgcgcaccgcaggcgctggtgctcgctccgacccgtgagctggcactgcaggtt
gcggattccttccagtcgtttgctgatcacctgggcaagattcaggtcctgccaatctac
ggtggtcagtcctacggagtgcagctgtcgggtctgcgtcgaggtgcacagatcatcgtc
ggcacgccgggtcgtgtcattgaccacctggaaaagggctcgttggacatctccgacctg
cgcttcctggtactggacgaggccgatgagatgctgcagatgggtttccaggaggatgtc
gagcgcattcttgccgacactccggatgacaagcaggtcgcactgttctcggctaccatg
ccggcttcgattcgtcgcctgtccaagcagtacctgagggagccggaagagatcaccgtc
aagtcccagactcgcactgcggacaatattcgccagcgcttcctgatggtcagccaccgc
aacaagctggacgcggtgacccgcatcctcgaggtcgaggaatttgaagcgatgatcatg
ttcgtgcgtaccaagcacgagaccgaggagctcgctgagaagctgcgtgcccgcggattc
tccgctgccgccatcaacggcgatatcccgcagaccctgcgtgagcgcacgattgatcag
ctcaaggacggccgcctggacatcctggtggcaaccgatgtggctgctcgtggcctggac
gttgaccgcatttcccacgtggtcaactacgacattccgcacgacaccgagtcctacgtc
caccgcattggtcgtaccggtcgcgctggccgctccggtgaggcgctgctgtttgtcact
ccgcgtgaggggcgcctgctgcgctcgattgagcgtgcgaccaagtcccagctgcacgag
atgaagctgccgaccgtcgatgaggtcaacgactcccgtaagcagaagttcgctgatgat
ttgactgaggcacttgctgattcgcaggttccggtcttccgcgagctcatcgaggagtac
gctgaagagcacgacactccgctggtcgatatcgccgctgctatcgctgcgcaggcacag
tcgggcgacttcctgatgaaggagccaccgcgtggccgtcgtcatgatcgtgaccgtgat
cgtttcgaccgcgaccgcaaccgtggccgcgatggtcgctcccgtggtgagcgcggtcag
ggcaagcgcgccgacctggtcgaattcgaacgcgagggcaccgcaacctaccgcatcagc
gtcggtcgtcgccagcacgtccgcccgggtgccattgtgggcgccatcgccaacgagggc
ggcctgtcatcaaaggacttcggacacatcgacatccgtggcgaccacaccctggtcgaa
ctgccggccaacctgccgcaagaagtcatcaacaacctctccgatacccgcatttccggc
cagctcattgggctgaagcttgacgacggcacctcggtcgacgacagcgatgactaccgc
ggtggccgtggtggctaccgtggcaatcgtcgtgatggcggtcgcggtcgcggaggatac
cgtggtggtcgtggccgcgatgaccgccgtggtggcggacgtggccggggtagctaccgt
ggaaacttcgatgacggtgacggtttcggcggtcgtggtcgcggacgcggtcgcagtggc
taccgtggtgaccgggatgaccgccgcggtggttaccgaggcggacgccgctag
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