Corynebacterium sp. ATCC 6931: DR71_1866
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Entry
DR71_1866 CDS
T03283
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
coa
Corynebacterium sp. ATCC 6931
Pathway
coa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
coa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DR71_1866 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
coa03021
]
DR71_1866 (rho)
03019 Messenger RNA biogenesis [BR:
coa03019
]
DR71_1866 (rho)
Transcription machinery [BR:
coa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DR71_1866 (rho)
Messenger RNA biogenesis [BR:
coa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DR71_1866 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
HeH
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIN82086
LinkDB
All DBs
Position
2105496..2107478
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AA seq
660 aa
AA seq
DB search
MTDTDTTATAGGPENLAALRMAELREIASSKGIRGISAMRKHELIEAIKNGAPAAGSAPA
RKSRAKKAAAGAADTGSKVKDAKESPSESADRDSSKSADKSDKGNDKRDDANADGREEMS
RSQQRRNRRNRARQRDQENQDDRSNDSRDDSDNGNDRGERNDNRNDRGDRGDRKDNRNDR
NERGDRNDRNNRNDRNNHDRDNDDDGRGNRNNRRGRNNNRNNDRNNHDDEGRGNRNRRNR
RNRRDRRGRDNNGGGHGGQDEIREDDVLQPVAGIVDVLDNKTAFVRTSGYLPGSNDVLVS
AQMVRKYGLRKGDAVTGQVRMPRENGSGQVTHGNGRNRRKYNPLVKVETINGLDLEQAKQ
RPNFAKLTPLYPNRRLRLETEQKILTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIA
NAIATNNPECYMMVVLVDERPEEVTDMQRSVRGEVIASTFDRPPSDHTAVAELAIERAKR
LVEQGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIEEGGS
LTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNPSGTRKDELLL
STEEARIMHKLRRILSALESQAAIDLLIKQLKKTRNNKEFLMQVASSAPMAADVDVDDML
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacggacaccactgccacggcaggcggcccagagaatcttgcggccctccga
atggcagaactgcgtgaaatcgcttccagcaagggcattcgcggcatctccgccatgcgc
aagcatgagctgattgaggccatcaagaatggtgccccggctgctggttccgcgcctgct
cggaaatcccgcgcgaagaaggctgcggctggggctgcggataccggttccaaggtgaag
gatgccaaggaatcgccgtcggaaagcgcggacagggattccagcaagagcgccgacaag
agcgacaagggcaacgacaagcgtgacgacgccaacgcggatggtcgcgaggagatgtcc
cgctctcagcagcgtcgaaatcgtcgtaaccgtgctcgtcagcgcgaccaggagaatcag
gacgatcgcagtaacgatagccgcgacgattccgataacggcaacgaccgcggtgagcgt
aacgacaatcgtaatgatcgcggtgatcgcggtgatcgtaaggacaaccgcaatgatcgt
aatgaacgcggtgatcgcaacgaccgcaataaccgcaacgatcgcaacaaccacgatcga
gacaacgacgatgacggtcgtggcaaccgcaacaaccgtcgtggccgcaacaacaatcga
aataacgatcgcaacaaccatgacgatgaaggtcgtggcaaccgtaaccgccgcaaccgt
cgcaatcgccgcgaccgtcgcggacgcgataacaacggtgggggacacggtggtcaggac
gagatccgtgaggatgacgttcttcagccggtggctggcatcgtcgatgtgctagataac
aagaccgcattcgtgcgcacgtccggctacctgccgggctctaacgatgtgctggtgtcc
gcgcaaatggttcgtaagtacggcctgcgcaagggcgatgccgtcacggggcaggtccgc
atgccgcgcgagaatggctcaggccaggtcactcatggcaacggccgtaatcgtcgcaag
tacaacccgctggtcaaggtcgaaaccataaacggcctcgatctggagcaggcaaagcag
cgcccgaacttcgctaagctcactccgctgtacccgaaccgtcgtctgcgtctggagacc
gagcagaagatcctcaccactcgcgtcatcgacctgattatgccgattggtaaggggcag
cgtgcgctcatcgtttcgccgccaaaggctggtaagaccacgatcctgcagaacatcgcg
aacgctatcgcgacgaacaatcccgagtgctacatgatggtcgtgcttgtcgacgagcgc
ccggaggaagtcaccgacatgcagcgtagtgtccgtggcgaggtcattgcctccaccttc
gatcgcccgccgtcagatcacacagcagtggccgagttggctatcgagcgcgcaaagcgt
ctggtggaacaggggcaggacgtcgtcgtactgctggactccattacccgccttggacgt
gcgtacaacaactcttcgccggcatcgggacgaatcctctccggtggtgtggactccaac
gctctgtacccaccgaagcgcttcttgggtgctgctcgaaacatcgaagaaggtggcagc
ctcaccatcatcgccaccgcgatggtagagaccggttccgcaggtgacaccgttatcttc
gaggagttcaagggcaccggtaacgctgagctgaagctcgaccgtaaaatctccgagcgc
cgcgtgttcccggcagtggatgtcaacccgtcgggtactcgtaaggatgagctgctgctc
agcaccgaggaggcgcgcattatgcacaagctgcgtcgcatcctctccgcgctggagtcg
caggctgctatcgacctgctgattaagcagctgaagaagacccgaaataacaaggaattc
ctgatgcaggtggcttcttctgcgccaatggccgccgacgttgatgtggatgacatgctt
tag
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