Corynebacterium sp. ATCC 6931: DR71_2077
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Entry
DR71_2077 CDS
T03283
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
coa
Corynebacterium sp. ATCC 6931
Brite
KEGG Orthology (KO) [BR:
coa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
coa03019
]
DR71_2077 (hrpA)
Enzymes [BR:
coa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DR71_2077 (hrpA)
Messenger RNA biogenesis [BR:
coa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DR71_2077 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
AAA_19
HA2_C
AAA_22
nSTAND3
ABC_tran
HA2_N
ResIII
AAA_30
AAA_16
NACHT
AAA_23
AAA_11
TsaE
T2SSE
PhoH
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AIN82338
UniProt:
A0A088QGB5
LinkDB
All DBs
Position
complement(2342076..2346131)
Genome browser
AA seq
1351 aa
AA seq
DB search
MTTPSRSDKPAPRVQSGNHHSRHRNSARPQRSDKPAKDTRKKELYQLADQLPIREAQSFR
RRLKRASAPKALSAISADLDFALERLEDRRNAIPRITYPAQLPVSARRDDIAEAIENNQV
VIIAGETGSGKTTQIPKICLELGRGVRGKIGHTQPRRIAARSVAERIAHELGEKIGQHVG
YAVRFDDRVGKDTCIKLMTDGILLAEIGRDRLLREYDTIIIDEAHERSLNIDFLLGYLKH
ILPQRPDLKIIITSATIDPERFARHFAPDDEHTAPIIEVSGRTYPVEIRYRPLVRTVVAK
NGQEKEVAIEQIDGVIAACEELMRLGDGDILVFFSGEREIREAAEAIEGRRWKGVEAVPL
FGRLSNAEQHRIFTPHSGRRIVLATNIAETSLTVPGIEYVVDTGTARISRYSTRTKVQRL
PVEDISQASANQRSGRCGRVADGVAIRLYSEEEFLSRPEFTDPEILRTNLASVVLQMISL
RLGAIEAFPFVQPPEHKAVRDGINLLTELQAITTTSASGRGRESDSGASADAPELTDIGR
QIARIPVDPRLARMLVEGYENTTLGAVTVIVAALSLQDVRERPLEFQAQADQLHARFKDT
TSDFNSLLKLWEYLEEKRRELSGNQFRKMCKREYLHYLRVREWQDLVRQLHQATAELGWS
LSARSLTSGVDDPDEVAKSLLPGLLSMIGTREGEGKEFTGTRNTKFLIHPSSALAKKPPR
WVMAAEIVETSRTFARNVGTIQPQWVEKVAPHLLKHQYSEPHWSAKRGAAMAYQKSTLYG
VPVVVDRLVPYHRVDADAARSMFIRCALVDGEWNTHHEFFKNNQDKLAEAAKIEEKQRSR
GIVVDDDVLYAFYDSKLPASITTAANFDRWWKKTKPKQPNLLDFDPNKLLNPDAGDIDDN
AFPEMWQQGSVDFSLSYKFEPGAPDDGVTLRVPVPLLAGLREDGFDWQVPGLRAELAEAY
IRTLPKALRKSVVPAPDFARRALETMTPYSGRFVDVFADALRRLGGSGINGADFDPSKLP
AHLRFNYAVIDRHGNIVDQSRDLAPLRAKHAATVSTAVSKRAKSAAHEAVKKWTSDNLGT
VAETVKSTVDGQSVTMYPTLVTTKDGVAVEVKPTKAQAEATLATTNLTMLLRECPVNAAQ
MTKGLPLQQRVGVDAWPHGGADGLVEDCRVAVIRDCMIAAGGPVRSPEEFNKLLEQVRSG
VASEVRQLVVGIAQAMPAYVSVTNQLDKWEGDAIDDMRRQLEFMFPKGAVAKHGWQHLRH
LPRYLQAMEIRLEEMNRDPGRDADREDEVTEAREYLAAKLERLPKGRAHSAEVRDIQWLI
EELRVSLFAQRLGTAHSVSLTRIKKRVDKLR
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgactactcctagccgttctgataaaccagctccacgtgtccagtcgggaaaccaccac
tcccgccatcgcaattccgccaggccgcagcgctctgacaagcctgctaaggacacgcgt
aaaaaggagctctaccagctcgctgatcaattacctattcgggaggcccagtccttccga
cgtcggctaaagcgagcatccgcgccgaaggcgctgtctgcaatctctgcagacctcgac
tttgcgctggagcggttagaagatcgtcgtaatgcgattcctcgcatcacctacccggcg
cagttgccggtgtccgcccgccgcgacgatattgcagaggcgattgagaacaatcaggtc
gtcattattgctggtgagactggctctggtaaaactacccaaatcccgaagatatgccta
gaactgggacgcggggtgcggggcaagattggccatacgcagccacgtcgtattgcggcg
cgttcggtggcggagcgaattgcccatgagctgggcgagaagattggacagcacgtcggt
tatgcggtgcgttttgatgaccgcgtgggcaaggatacctgcattaaactgatgaccgac
ggtatcctgctggccgaaattggccgcgaccgactgttgcgtgagtacgacaccatcatc
atcgatgaggcgcacgaacgcagcctcaacatcgacttcctgctgggatatttaaagcat
attctgccgcagcgcccagatctgaagatcattatcacttcggcgacgattgatccggaa
cggttcgcccgtcatttcgcgcctgacgacgagcacactgcgcccatcatcgaggtgtca
gggcgcacctacccggtggaaatccgctatcgccctctggtgcggactgttgttgcgaaa
aatgggcaagaaaaggaagtcgccatcgagcagatcgatggtgttatcgctgcgtgcgag
gagctcatgcggcttggcgacggcgatatcctggtgttcttttcgggtgagcgcgagatc
cgagaagcagccgaagccatcgagggcaggcgctggaagggtgtagaagccgttccactg
ttcggtcggctatctaatgcagagcagcaccgaatcttcaccccgcactccgggcgccgc
attgtgctggcgaccaatatcgcggagacgtcgctgacggtgccgggtattgagtacgtc
gtcgatactggtaccgcacgcatttcccggtactccacccgcacgaaggtgcagcgcctg
ccagtcgaggacatcagccaggcatccgcgaatcagcgctctggacgctgtggtcgtgta
gctgatggcgtggcgattcgtctctacagcgaggaggaatttctctctcgccccgagttt
acggatccggagattctgcgcaccaatctcgcttcggttgtactgcaaatgatttcgttg
cggcttggcgcgattgaggccttcccctttgtccagccaccagagcacaaggcagtgcgc
gatggcattaacctgctcacagagcttcaggctattaccaccacgtcggcgtctgggaga
ggccgtgaatctgactccggcgccagtgccgacgcccccgagctgacggacatcggccga
cagattgcccgtatacctgtcgacccgcgccttgcccgcatgctggtcgaagggtacgaa
aacaccactcttggggctgtgaccgtcattgtcgccgcgttgtctttgcaggatgttcgc
gaacgtccgctggagttccaagctcaggcagatcagctacatgcccgttttaaggacacc
accagcgacttcaactccctgctgaagctctgggaatacctggaggaaaagcgccgcgag
cttagcggtaaccagttccgcaagatgtgcaaacgcgagtacctccactatctgcgcgtt
cgcgagtggcaggacttggtgcgtcagctccaccaggcaacggctgagctgggctggagt
ctttcggcccgcagcttaaccagcggtgtcgacgatcccgacgaggtggcaaagtcgctg
ttaccgggtctgttatcgatgattggtacgcgcgagggcgagggcaaggaatttactggc
acccgaaacacgaagttcctcattcacccctcgtccgcgctggcgaagaagccaccccgc
tgggtgatggctgcggagatcgtcgagacttctcgaactttcgctcgaaacgttggcacc
attcagcctcaatgggtcgaaaaggtggctcctcacctgctgaaacatcagtactcggaa
ccgcactggtcggctaaacgcggtgcggctatggcttaccagaagtcgacgctctacggc
gtgcccgtagtcgttgaccgactggtgccttatcaccgtgttgatgcggatgccgcacgc
tctatgttcatccgctgcgcacttgtcgacggcgagtggaacactcatcatgagttcttc
aagaacaaccaagacaagctggccgaagctgcgaagatcgaggaaaagcagcggtcccgc
gggattgtcgtcgacgacgatgttctttacgcgttctacgactccaagttgcctgcttcc
attaccactgcagccaattttgaccgctggtggaaaaagaccaaacccaagcagccgaat
ctcctcgatttcgatccgaacaagctgctcaatccggatgccggcgatatcgatgacaat
gccttccccgaaatgtggcagcagggctccgtcgatttctcgctgtcctataagttcgaa
ccgggagctcctgatgacggcgtaacccttcgcgtcccggttcctctcctggcgggtctg
cgtgaagatggcttcgactggcaggttcccggtctgcgcgccgagctcgcagaagcctat
attcgcactctcccgaaggctctgcgtaagtcagttgtccccgcgccggatttcgcacgc
cgcgcgctggagacaatgacgccgtattcagggcgcttcgttgatgttttcgccgatgct
ttacgacggctcggaggctccggcatcaatggagccgattttgacccgtccaagctgcca
gcgcacctgcgctttaactatgcggttatcgaccgacacggcaatattgtcgatcagagc
cgtgatctcgcccccttgcgcgctaagcacgcggcaactgtctcgactgccgtttcgaag
cgtgcaaagtctgcagcccacgaagccgtgaaaaaatggacttcggacaatctcggcact
gtggcagagacagtcaaaagtactgtcgacggtcaatcggtcaccatgtatccgacgctt
gtgaccactaaggatggcgtggccgtcgaagtcaaaccaactaaggcccaggccgaggcc
acattggcaactaccaacctgactatgttgttgcgcgaatgccccgtcaacgctgcacaa
atgactaagggacttccacttcagcaacgcgttggtgtggatgcgtggccgcatggcggc
gcagatggactcgtcgaagactgccgcgtcgcagtaatccgcgattgcatgatagctgct
ggtggcccggtacgatcccccgaagaattcaacaagctacttgaacaggttcgctccggt
gtcgcctcggaggtacgccagttggttgtcggcattgcacaggccatgccggcctatgtc
tcggtgactaatcagctggataagtgggaaggcgatgctattgacgatatgcgtcgccag
ctggagttcatgttccccaagggagcggtggccaagcacggatggcagcacctgcgtcat
ttgccacgctatctacaagcgatggagattcgccttgaggaaatgaaccgcgatcccggc
cgtgatgcggaccgtgaagatgaggttactgaggctcgtgaatatttagctgcgaaactc
gagcggctgcccaaggggcgagcgcattctgcggaagttcgggatattcagtggcttatc
gaagagctacgcgtcagcctctttgcccagcgtttgggaacagcccacagtgtttccctg
acccgaataaaaaaacgtgtggataagctgcgctaa
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