KEGG   Caldicellulosiruptor obsidiansis: COB47_0118
Entry
COB47_0118        CDS       T01293                                 
Name
(GenBank) CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
cob  Caldicellulosiruptor obsidiansis
Brite
KEGG Orthology (KO) [BR:cob00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cob02048]
    COB47_0118
Enzymes [BR:cob01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     COB47_0118
Prokaryotic defense system [BR:cob02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    COB47_0118
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Cas3_HD Helicase_C HD
Other DBs
NCBI-ProteinID: ADL41489
UniProt: D9THC4
LinkDB
Position
140965..143298
AA seq 777 aa
MKIDIYKDIELYAKRFKSNKGNKYQTIYQHTMDLLNNMEKLFEEYNEEIEESCIKLQINY
QKLKYLLKLAIIYHDLGKANSKFQQKIRDKTRVKEVPQVKGLSKEVPHNFISIAFVDLED
EITAGNITVEDLENLLFAIAFSHDRDFDFNCQYFEKYICEDVSKYIENKTLKPLLELLPS
VLDRDLIINNSNYTYRVINQLRELMLKDSYNFSNKNTIFRTFLKGLLHRLDHSSSAGIST
EEPKIKNFPEKVEVYLKSKGSFSGFKDFQKKAVELSGRNIILFAPTGSGKTEFGINWAFK
SKLIYTLPIRVSINAMYERLAKIFGEDKVGILHSDSMIYLLERYMEIYRENQELETLFDS
VDLAKNMSLPIIVTTGDQIFTSALKWPGFEKIYSLFLYTKIIIDEPQSYSPESLAIIIKA
LQEIISLNGKFCLMSATVNPLILKYLGNYADYIQAYSDEELKKKYSHIIKIRQLSILDCI
DEIIECGRRKNVLVICNTVKRAQEVYKVIHENLRGFEKIHVELLHSRFLEGQKTQKEKII
ISNQMRNGIVISTQLVEASLDIDYDILFTELASADSLLQRMGRIYRKRQYEEAVPNVIIL
TKEPSGIGKVYQKEIVERTETFLKKFHENKITEYDKKELNEYVYDIDALSATNFINKFNK
AYEILKLGFRSEKKIEAQKIFRDVVTISGIPREVFNKNIDEIEEIVDKINSKDLNSIEKL
KLISHIRKYTVTAPLYFFEKGGISCYDKKLGLYLLDCEYDEQLGLKPPKDIEKSDIW
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgaaaattgatatatataaggatatagaactttatgcaaagagatttaaaagtaataag
ggaaataagtatcaaactatctatcaacacacgatggatttattaaacaatatggaaaaa
ctatttgaagagtataatgaagagattgaggaaagttgcataaaactgcaaataaattac
caaaagctcaaatatcttttaaaattagcaataatatatcatgacttgggcaaggcaaat
tcgaaatttcagcaaaaaataagggataagacaagagtaaaggaggtacctcaagttaaa
ggtttgtctaaagaggtgcctcataactttatatctatagcttttgtcgatttggaagat
gagataacagcaggaaatatcactgttgaagatttagaaaatctactttttgcaattgcg
ttttcgcatgatagagattttgattttaattgtcagtattttgaaaaatatatttgtgaa
gatgtttcaaagtatatagagaataagacattaaaaccattattagaactccttccctca
gttcttgatagggatttaataataaataattcaaactatacatacagagtaattaaccaa
ttaagagaattaatgctcaaagattcatataatttttccaacaaaaatacaattttcagg
acatttttgaaaggtttattgcacagacttgatcattcaagttctgcaggaattagcaca
gaagaaccaaaaattaaaaattttcctgaaaaggttgaagtttatttaaaaagcaagggg
agttttagtgggtttaaggattttcagaaaaaagcagtggaactttcaggaagaaatatt
attttatttgctccgactggaagtgggaaaacagagtttggaataaactgggcatttaaa
agtaagttaatttacactcttccaattcgtgtttcgataaatgcaatgtatgaaagactt
gcgaaaatctttggtgaagataaagttggaattttacattctgatagtatgatatatctg
cttgaaagatatatggaaatatatcgtgaaaatcaagaattagaaactctatttgatagt
gttgatcttgctaagaatatgagtctaccaataattgttaccacaggagaccagattttt
acctcggctttgaagtggccaggctttgaaaagatttattctctgtttttatatacaaag
attataatagatgagccgcagagctattcaccagaatctttggcaattataataaaagca
ttacaagaaattataagtttaaacggcaagttttgtttgatgagtgcaacagttaatcca
cttattttgaaataccttgggaattatgctgattatatacaagcatattcagatgaggaa
ttaaaaaagaaatattctcatattattaaaatcaggcaactttcaattttagattgtatt
gatgaaataattgaatgtggaaggcgaaaaaatgtacttgttatatgcaataccgtaaaa
agggcacaggaagtttacaaggttatacatgaaaatttaagaggatttgaaaaaattcat
gttgagcttttacattcacgctttttagaagggcagaagacacagaaggaaaaaattatt
atttcaaatcagatgagaaacgggattgtaatttcaactcaacttgttgaagcatcgctt
gatatagactatgatatattgtttaccgagcttgcctcagcagattctttacttcaacga
atgggaagaatatatagaaaaagacaatatgaagaagcggttccgaatgtcatcatttta
acaaaagagccgagtggaattggaaaggtatatcagaaagaaattgttgagaggacagaa
acatttttaaaaaaatttcacgagaataaaattacagagtatgataaaaaagaacttaat
gagtatgtatatgatatcgatgcactttcagctacaaattttataaacaaatttaataaa
gcatatgaaattttaaaacttggatttagatcggagaaaaaaattgaggctcaaaaaatt
tttagagatgttgttacgatatcagggataccaagagaggtatttaacaaaaatattgac
gagatagaagaaattgttgataagataaactcaaaagatttgaattctattgagaaatta
aagttaatttctcatatcagaaaatatacagtaactgccccgctatacttttttgaaaaa
ggtggaataagctgttatgataaaaagttaggattatatcttcttgattgtgaatatgat
gaacaattgggtttaaagccaccaaaagatatagaaaaatctgatatatggtaa

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