Caldicellulosiruptor obsidiansis: COB47_0200
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Entry
COB47_0200 CDS
T01293
Name
(GenBank) ABC transporter related
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cob
Caldicellulosiruptor obsidiansis
Pathway
cob02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
COB47_0200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cob02000
]
COB47_0200
Transporters [BR:
cob02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
COB47_0200
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DUF87
ABC_ATPase
MMR_HSR1
AAA_29
RsgA_GTPase
ATP-synt_ab
NTPase_1
AAA_23
AAA_22
MeaB
AAA_16
FtsK_SpoIIIE
AAA_19
NB-ARC
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADL41558
UniProt:
D9THJ3
LinkDB
All DBs
Position
251887..254148
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AA seq
753 aa
AA seq
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MKKVLRYVKPYTLLVLAAVLFVFIQAMSELTLPDYMSKIVNVGIQQSGIENAVPEAISSS
TMEKVLLFVPQDKKDDILNMYKLLTKSSDDYSSYLKKYPLLSKEDIYVLKKKDRDSLDRV
NVQMGKAILAAFGIEKMKKEAKGGIINFNGRQIPASIDLFAILKQLPQEQINQIQQEINK
KFSSLGDSMIVQAAAVAIKDEYKKIGIDIGKMQNAYIIKMGLLMLLLTLVSAISTILVAF
FAARVAAGVARDLRKDVFSKVESFSIEEFDKFSTASLITRTTNDIMQIQMLLVIGIRMIF
FAPVMGFGGVIKALSKSVSMSWIIALAVIVLLGLIMILYAIAMPKFMIMQKLIDKLNLVA
RENLSGIMVVRAFNAQKFEEQRFDEANRDLTKVGLFVNRAMAVLFPSMLFIMNGTTLLIV
WVGAHYIENSSMQVGDMLAFMQYAIQIIFSFLMLSMLFILVPRAAVSAGRIEEVLSTEPS
IKNPEKPEKFREDMKGMVEFKNVFFKYPGAEEYVLENINFKVMPGQTVGIIGRTGSGKST
LVNLIMRFYDATEGQVLVNGVDVRSVKVEDLRERIGYVPQKSWLFSGTIKSNLKIGNDFA
TDEDLRQAAEIAQALEFIEEKPQKFDTEIAQGGTNVSGGQKQRLSIARALVKNPDIYIFD
ESFSALDFRTELKLRRALKEKLKDKTVIIVSQRIATLIHADQIIVLEDGKIAGIGKHEEL
LKTCETYREIALSQLPEEVTTVENNNAKRCNFN
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaagtactaagatatgtaaaaccatatactctgcttgtcttagcagcagttttg
tttgtgtttattcaagcaatgagtgaacttacgctgccagattatatgtcaaagatagta
aatgtaggtattcagcaaagtggtatagaaaacgcagtgccagaagccatatcaagttca
actatggaaaaagtgcttttgtttgtgccgcaagacaaaaaagatgacattttaaacatg
tataagcttttaacaaaaagttctgatgactacagtagctatctcaaaaaatatcctctt
ttatccaaagaagatatttatgtattaaagaaaaaggacagggacagtttagacagagtt
aatgttcagatgggtaaagctattttagctgcttttggtatcgaaaagatgaagaaagaa
gcaaaaggcgggattataaactttaatggcagacagataccagcaagtattgaccttttt
gctattttgaaacagttaccacaggaacagataaatcaaattcagcaagaaataaacaaa
aagttttcatcgcttggtgacagtatgatagttcaggcagcagctgtagcgataaaggat
gaatataaaaaaattggaattgatataggtaagatgcagaatgcatatattataaaaatg
gggcttttgatgcttcttttaactttggtttcagcaatctctactattctggttgctttc
tttgctgcaagagtggcagctggtgttgcaagagatttgaggaaagacgtgttttccaag
gttgaaagtttttcaattgaagagtttgataagttttcaacggcatcactcattacaaga
acgacaaacgatatcatgcagattcaaatgcttcttgtgattggaataaggatgatattc
tttgcacctgtaatgggatttggtggtgtaatcaaagcactatcaaaaagcgtttcaatg
tcgtggataattgctcttgctgtaattgttcttctggggcttatcatgattttatatgcc
attgcaatgccaaagtttatgattatgcaaaagctaatagataagttaaaccttgtagca
agagagaatctgtctggtatcatggttgtacgggcatttaatgcacaaaagtttgaagaa
caaaggtttgatgaggcaaatagagatttgaccaaagtaggtctttttgtaaacagagca
atggcagtgctttttccttcaatgctgtttattatgaatggcacaacccttttgattgta
tgggttggagcacattatatagaaaattcaagtatgcaggttggagacatgcttgcattt
atgcagtatgctatacagataatcttttcattcttgatgctttcaatgctatttatactt
gttccaagagctgctgtttcagcaggacgtattgaagaggtactttcaacagaaccttca
atcaaaaatccggaaaagccggagaagttcagagaagatatgaaaggaatggtagagttt
aaaaacgtgttcttcaaatatccaggggctgaagagtatgttcttgaaaatataaacttc
aaagttatgccagggcagacggttggcataattggaagaacgggaagtggaaagagcact
cttgtaaaccttattatgagattttatgatgcaacagaaggacaggttttggtaaacggt
gttgatgttagaagtgtaaaggttgaggatttaagggaaaggataggatatgttccacaa
aagagctggctttttagtggtaccatcaagtcaaacctcaagattggcaacgattttgca
acagatgaagatttgagacaggcagcagagattgctcaggcacttgagtttatagaggaa
aaaccacaaaagtttgatactgagattgcacagggtggaacaaacgtctcgggaggacag
aaacagagactttcaattgcaagggcgcttgtaaaaaatccggatatttatatattcgat
gaaagcttttctgctcttgactttagaactgaactaaagttaagaagagctttgaaagaa
aagcttaaagataagacagtaataatagtatcgcaaagaatcgcaaccttgattcatgca
gaccagataatagtgcttgaagatggtaagattgctggtattggcaagcatgaagaactt
ttaaaaacctgtgaaacttatcgtgaaattgcactttcacaacttccagaggaggtgaca
acagttgaaaataacaatgcaaaaaggtgtaattttaattag
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