Caldicellulosiruptor obsidiansis: COB47_0291
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Entry
COB47_0291 CDS
T01293
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cob
Caldicellulosiruptor obsidiansis
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cob03400
]
COB47_0291
Enzymes [BR:
cob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COB47_0291
DNA repair and recombination proteins [BR:
cob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
COB47_0291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
ADL41638
UniProt:
D9TI06
LinkDB
All DBs
Position
349027..351654
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AA seq
875 aa
AA seq
DB search
MKKAYLLKKLNLSLLDDAQPNELIILPRRFVINKLKERLVEKNRVLFDTDIFTFDDLITP
AKNEVLKTRKVITREQEVLVVFQLLKSIFKGKTNFENVLTYEFTNQVIYLLNLMFLESKD
YSQNNFESAENYGFLIKLFEKYKEYLDQNNLVNFSYLQDLAIKLFEENRLEFKDYSCAKI
AFFTDFRCDQKRILKLIAEEITDIEVFMPFFDDIEICIETAKFLESLGFDIVFSTNKEYS
LGNLDSPSCQLKVYSYPNIILEINSLVKEIKKDISERKAGFDRIAVVVPSVERYKDALVQ
TFSEEMLPVNLSCQKSLIEFGFIRFVLELLEFLGGEFDKKNFERIVSHKFLNTEKADFEI
LFSKMKNMSILELEQIEFVLEELEFFANLYAFDDVIENLIKVRRVFNRLKRIKNEYDKLP
KPFVSWLENTRKVFERLGITKHAEFVNDIEFIKAFYHLNEIFKKGQEDFKEFDSDFTFEE
FLGIFKTILSQKMVDVSINILSGIDVLSIQDVLGSNYQKVYLIGLSDDILPRSNSEGFLR
NMRLKEELMLDEIKNFDYIFQKDLVHFRTVLNSYDVYMSYPRYYQTETNKSPFLELEGIE
EVPVLKSYIPSDDKVTYREYKFIKNVNKKDDGKTYTCAEVPEINQIKDRELIEYQSCPLK
FAFKKFDVDEKEREEKHFLSNLQLLFSCIQKILSSKDPQETLDFLLSNIRYTHNEPVKKL
AALDIMQISLEIVERMNEYGVEEFTPQNMKDKVFVVRKMFEGVELQLFPNFVVKIDDQEI
CGFVKAKISSEKEIDKIWIANYIFELDKVAAIYLFEKPRFVIYENTNGSLDKLTQEILSG
IKEGINKLGEIETYKKAKSVKNCFSCEYSHVCLLF
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagcataccttttaaaaaaacttaatttaagccttcttgatgatgcacaacca
aatgaactcataattcttcctcgacgctttgttataaataagctcaaagaaaggcttgtt
gagaaaaaccgagttctttttgataccgatatatttacatttgatgatttaataacccct
gccaaaaatgaggtgctaaagacacggaaggtaatcacaagggaacaagaggttttagtt
gtatttcaacttctcaaaagtattttcaaagggaaaacaaactttgaaaatgttttgaca
tacgagtttacaaatcaggtaatataccttttgaatttgatgtttttagaatcaaaggac
tattctcagaacaattttgagtcagctgaaaattatggttttttaataaagctttttgaa
aagtacaaggaataccttgaccaaaacaaccttgtcaacttttcataccttcaggatttg
gcaataaaactttttgaagaaaacagacttgagtttaaagactacagttgcgcaaagata
gcattttttacagatttcagatgcgaccaaaagagaatactaaaacttattgcagaggaa
ataactgatatagaagtttttatgccattttttgatgatattgagatctgcatagaaact
gccaagtttttagaatcgcttggatttgacatagtgtttagtacaaataaagagtattca
ttgggtaatttagactcaccctcttgtcagcttaaagtttattcctatccaaacataatc
cttgagataaattctcttgtaaaagagattaaaaaagacatctctgaaagaaaagcaggt
tttgacaggatagcagttgttgtgccaagtgtggaaaggtataaagatgctttggtgcag
acattttctgaggagatgttacctgtaaatcttagctgtcagaagagtcttatagaattt
ggatttatcaggtttgttttagagcttttagagtttttgggtggagagtttgataaaaag
aattttgaacggatagtatcgcataaatttttgaacacagaaaaggcagactttgagatt
ttgttttcaaagatgaaaaatatgagtattttggagcttgagcagatagaatttgtgctt
gaagagttggagttttttgcaaatttatatgcatttgatgatgtgattgaaaaccttata
aaggttcggcgggttttcaatagactaaagagaataaaaaatgaatatgataaattgcca
aagccatttgttagctggcttgaaaatactagaaaagtttttgagagattaggaataaca
aaacatgctgaatttgtaaatgacattgaatttataaaggctttttatcatttgaatgag
atattcaaaaaaggccaggaagactttaaagaatttgactctgattttacttttgaagag
tttctgggtatttttaaaaccattctttctcagaagatggttgacgtttcgattaatatc
ttaagcggcattgatgttctcagcattcaagatgttctgggctctaattatcaaaaggtt
tatctgattggtctttcggatgatattttgccacgctcaaattctgaaggatttttacga
aacatgagattaaaagaagagctcatgctcgatgagataaagaattttgactacatattt
caaaaagaccttgtgcactttagaaccgttttaaactcctatgatgtgtatatgtcatat
cctcgttactaccaaacagagacaaataagagcccatttttggagttagaaggtattgaa
gaagtacctgttttaaaaagctacataccaagtgacgataaggtgacatacagggaatat
aagtttataaagaatgtaaataaaaaagatgatgggaaaacttacacgtgtgctgaggtt
ccagaaattaaccagataaaagatagagagcttattgagtatcagagctgtcctttgaag
tttgctttcaaaaagtttgatgttgacgagaaagaaagagaagaaaaacattttctttcg
aacttgcagcttttgttttcatgtattcaaaagatactttcctcaaaagatcctcaggag
acacttgattttttgctttccaatattcgctatacgcataatgaaccggttaaaaaactt
gcagctttagatattatgcaaatatctcttgaaattgttgagagaatgaatgaatacggg
gttgaagagtttactcctcaaaatatgaaagacaaggtatttgtagttagaaagatgttt
gaaggagttgaacttcaactctttcctaattttgttgtaaaaattgatgaccaagaaata
tgcggctttgtaaaagcaaaaatttcgtctgaaaaagagattgacaagatttggattgct
aattacatctttgagctggacaaagttgctgccatatatctttttgaaaaaccacgattc
gtaatttatgaaaatacaaatggttctttggataagttaactcaagagatcttaagtggg
ataaaagaagggatcaataaacttggtgaaattgaaacttataaaaaagcaaagtctgtt
aaaaactgtttttcttgcgaatatagccatgtttgtctgttgttttaa
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