Caldicellulosiruptor obsidiansis: COB47_0292
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Entry
COB47_0292 CDS
T01293
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cob
Caldicellulosiruptor obsidiansis
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cob03400
]
COB47_0292
Enzymes [BR:
cob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COB47_0292
DNA repair and recombination proteins [BR:
cob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
COB47_0292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
ADL41639
UniProt:
D9TI07
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All DBs
Position
351673..354540
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AA seq
955 aa
AA seq
DB search
MVVKMSDIIIYSASAGCGKTENIANLYIDLISQKKILPTEIVCITYTEKAARELKNRIIS
KAKQRRLDLLTISKIQNSHIKTIHSFCMYLLRFYWAWAKVDANFKIVPEIDRLILELIDD
YLSVFPATLGKLPQERFFIEEYFHFAESIAQEYSNSAKYVGKTCHLESETFYIFEHLSDR
LNDQFLKELTYDLVLQRTFELLSVPEVNRDVKNRFKFLIVDEFQDSNFLQKSIFENIAEN
IYYVGDKKQSIYRFQGAEPEVFDEAMENCSQVLELCENFRTNSELGKKIDKIATILFPDY
KPLSYKHQADGFLKVVEIVNKAREEIIQNEAIYVAKKIKEMVESGFEISVGGKPKRKVKY
SDFAVLSRKIQNIAHIYKRVFEDYDVPLDINFKRGLLEQKEIVPLLGLLEILQYPDKKSG
YLRLLANDIFKVDKFTLLFYEMSKIECYVPEDVLKFIAKQRDNLFVQKISEILYEFEDMF
EYSYKVYKFFGKGAYENVRLFYDLAEESKSFSIEELYNFINYQGERFSSFSSLDDSAVLI
SIHSAKGLSFPIVFLVGLCESTGYFPGRSPKLRGSYDTSTREYRIAPFWMEKEYTRIKNI
SKQQEKEEGKRLFYVAITRPMAGLFLINSSLREAIKKRGGVKSFGEEVGLNYILAKAEEI
GIEKEVVEIKDTEEDLSNDFTCKQKNTIESTLPLMILPDEFENRFKFLSPSHIMDFKRCP
AMFSLKYIMGLPVFDELSSKEEIQQNAKVLGTTVHRVLELTSLKDIKSLDTNIALAVLEN
DFESEKIVRELILNFFESQFVKEIKDKVIKEESEIRFYFKLGNQMIYGIIDKVYHLEDKI
FLVDFKTNLHFDDTKFNIYIPQLFIYTMAMKERFPQKNIFSSIFWLREGRKFDYELKEEH
LEDVMDVIRRIRSIKSRKDVLAIIEDCVKKDCCGCEYEFYCKDEQNIKLIRKKLE
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgaaaatgagtgatataatcatttatagtgcttctgccgggtgtggaaaaaca
gaaaacatagcaaacttgtacatagacttaatcagccagaaaaagattttaccgactgaa
attgtctgcataacgtacactgaaaaagctgcaagggaacttaaaaatagaataatctca
aaagcaaagcaaagaaggcttgatttgctcacaatttcaaagattcaaaactcccatatt
aagaccatacattcattttgtatgtatcttttaagattttactgggcatgggcaaaggtt
gatgcaaactttaaaattgtccctgaaatagacagactgatacttgaacttatagacgat
tatctttcagtttttcctgcaactttggggaagctgccgcaggagaggtttttcattgag
gagtatttccactttgctgaaagcatagcacaggagtattccaactcagcaaagtatgtc
gggaaaacttgtcaccttgaaagtgaaactttttacatttttgagcatttgtcagacagg
ttaaatgaccagtttttaaaagaactcacatacgatttggttttgcagaggacctttgag
cttttaagcgttccagaggtaaatagagatgtaaaaaacagatttaaattcttaattgtc
gatgaatttcaagattcaaactttttgcaaaaatcgatatttgaaaatattgctgaaaac
atttattatgtgggagacaaaaaacagtccatttaccgttttcagggtgcagagccagag
gtttttgatgaagctatggaaaactgcagtcaggttttagaactctgtgaaaactttaga
acaaactctgagcttggcaaaaagatagacaaaattgctacaatactttttccggactac
aagccgctttcttacaagcatcaagctgacggatttttaaaggttgtggagattgtaaat
aaagcaagagaagagattattcaaaatgaagctatttatgttgcaaaaaagataaaagag
atggttgaaagtggttttgagataagtgtgggtggcaagccaaaaagaaaggtaaaatac
tctgactttgcagtgctgtcgcgaaaaattcaaaacattgctcatatttacaaaagggtg
tttgaggattatgatgttccacttgatattaacttcaaaagagggcttttggagcaaaaa
gagatagtaccgcttttaggccttcttgagattttgcagtatccagacaaaaaatccggg
tacttaagacttcttgcaaatgacatatttaaagtggacaaattcacgcttctcttttac
gagatgagcaaaatagaatgctatgttccagaagatgttttaaaatttattgcaaaacag
cgtgataacctgtttgtccaaaagatttcagagattttatatgagtttgaagacatgttc
gaatatagctacaaggtctacaagttttttggcaagggtgcatacgaaaatgtcagactt
ttctatgacttggcagaagagagcaaaagtttttcgatagaagaactttacaattttata
aattatcaaggcgaaaggttttcaagcttttcttctcttgatgacagcgcagtacttatc
agcatacattcagcaaaaggactcagctttccaatagtgtttttggtcggactttgcgag
agcacagggtactttccgggcagaagtccaaaactgagaggctcttatgatacaagcaca
agagagtatagaattgctcctttttggatggaaaaagaatacacaagaataaagaatata
tcaaaacagcaggaaaaagaagagggaaaaaggcttttttatgttgccataacaagaccg
atggcagggcttttcttgataaactcaagcttaagagaagctataaagaaaagaggaggg
gtaaagtcgtttggtgaagaggtgggtttgaattacattctcgcaaaggcagaggagatt
ggaattgaaaaagaagttgtggagataaaagacactgaagaagatctatctaatgatttt
acttgtaaacagaaaaatacaattgaaagtacattacctctaatgattttacctgacgag
tttgaaaataggtttaagtttttgtcaccttcacacataatggattttaaaagatgtcct
gccatgttttcgttaaagtatattatgggtcttccagtttttgatgaactgagctcaaaa
gaggagatacaacagaacgcaaaagtacttggtacaaccgttcacagagttttagagctc
acgagcttgaaagatattaagagtttggataccaacattgccttagccgtgcttgaaaat
gactttgaaagtgaaaagattgtgagagagcttattttaaacttttttgaaagtcagttt
gtaaaggaaatcaaagataaagtgataaaagaggaaagcgaaattagattttatttcaaa
cttggcaatcaaatgatatatgggataattgacaaggtgtaccatcttgaagataagatt
ttccttgttgattttaaaacgaaccttcattttgatgatacaaaattcaatatttacatt
ccacagcttttcatttacacaatggcaatgaaagaaagatttccacagaaaaatattttt
tcttctatcttttggttaagagaaggtagaaagtttgactatgaactaaaagaagagcac
cttgaagatgtgatggatgttataagaaggataagaagtattaaaagtagaaaggatgtg
cttgcaataatagaagattgtgtgaaaaaggattgttgtggctgtgaatatgaattttat
tgcaaggatgagcaaaatattaaattgataaggaaaaagcttgaatag
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