Caldicellulosiruptor obsidiansis: COB47_0424
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Entry
COB47_0424 CDS
T01293
Name
(GenBank) SNF2-related protein
Organism
cob
Caldicellulosiruptor obsidiansis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-ProteinID:
ADL41755
UniProt:
D9TIC3
LinkDB
All DBs
Position
complement(506270..509689)
Genome browser
AA seq
1139 aa
AA seq
DB search
MSIELNYQTIVQFLTDSQLAQLAKNRKAFEKGISLARKVEKEDIQYDQEENAIFGKVEDG
KNEYWVFVDFDLPSYMTQDFFGNIKIENIIISAACTCSLENIDLESEEDIDIEDLVLFDD
FCRHIIAVLKSFADGKYILNSLNKMQETLLQMLEQKLNEAIEKERKQNSRIYQFFASNFE
ENYIKFSLDNLSIKSPNIFLEKYFGYSTNDLVTLKLKVKTLDLKRDYVVSNIPEFLKAYE
QKQPFQFGKNFVYNPTYHFFGEKDKKFLNALLKYLNFLDLETEKNTIYLPVKIANEIIEI
LDNEEIFISFDYFVANYYDAQKVKVDLCTKVKPKILFKLEDNQVKLYSDLIDTANKKFLY
SDGSYFVSGDTLYKLSPEQKIFSSIIKKMAEANRVFNFFKVEYVNFFTLNKEDFCEFMNK
YYLFLNEHFELEIDPDLKKLILEDYIIKPKLYLEFENERFVARISGMNEIFDIISKTKKV
PLFDYFGLFEIQSILFAYRFNEIESDQEFCYECVDPDLFMEFLAEGIPQIQNITDVYYSE
DFKKLKIKKDVKIIPCLKYSKHSIDFWLESDDLDSSELKNILDAIKKKKKYYKLKDGSIL
ILESPNIKRFVSFIESASDIGQVIKEKAELSLQEAVAVTKLLEESGIQANGVESIKNIVE
KIENIREIDIEIPVELQGVLRDYQKLGIKWLSSLFENELGGILADDMGLGKTLQVLGFIL
ANKQKIKKPVLAIVPTSLIYNWKQEIEKFAPGLKTLIIDSTPAKRKKAIEKIPEYDIVIT
SYALLRKDIEFYKDIDFSVCILDEAQYIKNPHSQIKLAVKEICADAKFALTGTPIENNLI
ELWSIFDFILPGYLGGAEKFVERFAMLIYSGNNNALEKLKKLIKPFVLRRVKQDVLNELP
ELIETNIQVAMSPEQEKIYKQFLVSAKKEIEKEIDSAGFEKSQIKIFSLLTRLRQICCHP
KLVFEDYKGSSGKMEALKEILQDCLESGHRVIIYSQWTSMLSIIKKMLDKEKILYFYLDG
ATKAEDRVEMVNRFNSGEKNVFLLSLKAGGFGLNITGADVVIHFDAWWNPAVENQATARS
HRLGQKNVVQSFKIIAKNSIEEKILALQQKKKDLFDSLIEASQSFIGKLTKEEIMELLE
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaatagaacttaattatcaaacaattgtgcagtttttaacagacagtcaacttgct
caacttgcaaaaaatagaaaagcttttgaaaaaggaatatctcttgctcgaaaggtagaa
aaagaagatattcaatatgaccaagaagaaaatgcaatattcggcaaagtagaagatggt
aaaaatgaatattgggtttttgttgattttgatttgccttcatatatgactcaggacttt
tttggtaatatcaaaattgaaaatataatcataagtgctgcgtgtacatgcagtttggaa
aatattgatttagaatcggaagaagatattgatatagaagatttagttctgttcgatgat
ttttgtcggcatataattgctgtgttaaaaagttttgccgatggtaaatatattctcaat
agcctaaataaaatgcaagaaactttgcttcaaatgttagaacaaaaattaaatgaggct
attgagaaggaaagaaaacaaaattcccggatttatcaattttttgcaagcaattttgaa
gaaaattatataaagttttcacttgataatttatctataaagtctcctaacatattttta
gaaaaatacttcggatattctactaatgatttagtaactttaaaattaaaagtaaaaact
ttagatttaaaaagagactatgtggtttcaaatataccagaatttttaaaagcatacgaa
caaaaacaaccatttcagtttggtaagaattttgtgtacaatcctacttatcattttttt
ggtgaaaaagacaaaaaatttttgaatgcgctattgaaatatttgaattttttagattta
gaaacagaaaaaaatactatttacctacctgtaaagatagcaaatgaaataatcgaaatc
cttgacaatgaagaaatttttatatcttttgattattttgtggcaaattattatgatgct
caaaaagtaaaagttgatctttgcactaaagtaaaaccaaagattttatttaaacttgaa
gataatcaggtaaaactttatagtgatttaatagacactgccaacaaaaaatttttatat
agcgatggtagttattttgtctcaggtgacactttatataagctttcgccagagcaaaag
atattttcttcaattatcaaaaaaatggctgaagcaaatagagtatttaactttttcaaa
gttgaatacgttaatttttttaccctcaataaagaagacttttgtgagttcatgaacaaa
tattatttatttttaaatgagcactttgaattagaaattgacccagacctcaaaaaatta
atattagaagattatattattaaacccaaactatacttagaatttgaaaatgaaaggttt
gtcgcaagaatcagtggaatgaatgaaatatttgatataatatcaaaaacaaagaaagtt
ccattgtttgattattttggtttgtttgagatacaaagtattttatttgcttataggttt
aatgagatagagtctgaccaagaattctgttatgaatgtgttgaccctgatttgtttatg
gaatttttagcagaaggtattccacaaatccaaaatataaccgatgtttattattcagaa
gattttaagaagcttaaaataaagaaagatgtaaaaattattccctgcttaaaatattca
aaacactcaattgacttctggcttgaaagtgatgatcttgatagctcagagcttaaaaat
attcttgatgcaatcaagaaaaagaaaaagtattacaaactcaaagatggctcaattttg
attttagaaagtccaaatataaaaagatttgtttcatttatagaatctgcatccgacatt
ggccaggttataaaagaaaaagctgagctttctttacaagaagcagtggctgtaacaaaa
cttttagaagaaagcggaattcaggcaaatggagttgaaagtataaaaaatattgttgaa
aagatagaaaatattagggaaattgatattgaaatcccagttgagcttcaaggtgtgtta
agagattatcagaaacttggaataaaatggttatcttctctatttgaaaatgaacttggt
ggaattttagctgatgatatggggcttggaaaaactctgcaggtacttggctttattctt
gcaaataaacaaaaaattaaaaagccagtattagccattgtaccaacatcacttatttat
aactggaaacaagagattgaaaaatttgcgccaggtctgaaaactttaattattgactca
acacctgcaaagcgcaaaaaagctatagaaaaaataccagagtatgatattgtaattaca
tcatatgcacttttgagaaaagatatagaattttataaagacatcgattttagtgtttgt
atcttagatgaagcacagtacataaaaaatcctcattcacaaataaagctggctgtaaaa
gaaatctgtgcagatgctaaatttgccctgacaggtacaccaattgaaaataatctcatt
gaactgtggtcaatctttgattttatacttcctggatatttaggaggagctgagaaattt
gttgagcgttttgcaatgctaatttatagcggaaacaataatgctttggaaaaattaaaa
aagttgataaaaccgtttgttttaagaagagtaaaacaagatgtattaaatgaacttcct
gagctaatagaaacaaatatccaagttgcaatgagccctgaacaggaaaaaatttacaag
caatttttagtctcagccaaaaaagagattgaaaaagaaatagattcagctgggtttgaa
aaaagtcaaataaaaatattttctttgctgacaagactaagacaaatctgctgtcatcca
aagcttgtatttgaagattacaaaggaagctctggtaagatggaagcactgaaagaaatt
ttacaagactgtttagaaagcgggcacagggtaattatatattctcagtggacttcaatg
ttatctattatcaagaaaatgcttgacaaggaaaaaattttatacttttatttagatggt
gcaacaaaagctgaagacagagttgaaatggtcaacaggttcaacagtggagagaaaaat
gtctttttgctttcgctaaaagctggtggatttggactcaatattactggcgcagacgtt
gttattcactttgatgcatggtggaaccctgcagttgaaaaccaggcaacagcaagatca
cacaggctgggtcagaaaaatgttgttcagtcatttaagattatagccaaaaattctata
gaagagaaaatacttgctctacagcagaaaaagaaagacttatttgatagtttaatcgaa
gcaagtcaatcttttataggaaaactcacaaaagaagaaataatggagcttttggaatga
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