Caldicellulosiruptor obsidiansis: COB47_0602
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Entry
COB47_0602 CDS
T01293
Name
(GenBank) hypothetical protein
KO
K06283
putative DeoR family transcriptional regulator, stage III sporulation protein D
Organism
cob
Caldicellulosiruptor obsidiansis
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cob03000
]
COB47_0602
Transcription factors [BR:
cob03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
COB47_0602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIIID
HTH_50
HTH_17
HTH_38
HTH_22
HTH_23
HTH_11
HTH_Tnp_ISL3
HTH_10
MerR
HTH_DeoR
HTH_7
LacI
DUF5673
HTH_29
TetR_N
HTH_26
Xre-like-HTH
HTH_IclR
Speriolin_N
Motif
Other DBs
NCBI-ProteinID:
ADL41920
UniProt:
D9TIT8
LinkDB
All DBs
Position
711890..712174
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AA seq
94 aa
AA seq
DB search
MKEDIEKRTLLAAEIMIKYNATVRKVARILGVSKSTIHNDLAERLLYINKELYKQVRAIL
EKNKQERHIRGGLATKRKYLIKKSQLISKNSGII
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggaggatattgaaaaaagaactcttcttgcagcagaaattatgattaagtacaat
gcaactgtgaggaaagttgcaaggattttaggtgtttcaaaatctacaattcacaacgac
cttgcagaaaggcttttgtatatcaacaaggaactttacaagcaggtaagagcaatattg
gagaagaataagcaagagaggcacataagaggaggacttgcaaccaagagaaagtatctc
ataaaaaaatcacagctcatttctaaaaatagtggtataatatag
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