Caldicellulosiruptor obsidiansis: COB47_0615
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Entry
COB47_0615 CDS
T01293
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cob
Caldicellulosiruptor obsidiansis
Pathway
cob00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COB47_0615
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cob01007
]
COB47_0615
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cob03016
]
COB47_0615
Enzymes [BR:
cob01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
COB47_0615
Amino acid related enzymes [BR:
cob01007
]
Aminoacyl-tRNA synthetase
Class II (A)
COB47_0615
Transfer RNA biogenesis [BR:
cob03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
COB47_0615
Prokaryotic type
Other AARSs
COB47_0615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Thiamine_BP
Motif
Other DBs
NCBI-ProteinID:
ADL41933
UniProt:
D9TIV1
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All DBs
Position
721294..722781
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AA seq
495 aa
AA seq
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MQDFEFTQDELNEQIQNRIKKLRELQQNKYNPYEKVKYDPTHYSTDIKENFDQFEGKFVC
VAGRMLSKRGHGKASFVDILDTKGKIQIYIKIDEVGEEKYQEFKEYYDIGDIIGVKGEVF
KTHKGEVSIKAKEIEMLTKCLRPLPEKWHGLRDVDTRYRKRYLDLIVNPQVRDTFIKRSL
IIRSIRKFLDDRGFLEVETPVLSPIAGGAAARPFITHHNALDIDLYLRIATELHLKRLIV
GGFDKVYELGRVFRNEGISIKHNPEFTTIEIYQAYADYKDMMDLTEELITTVAQEVLSTL
KITYQGQEIDLTPPWQRLTMVEAIKKYVGVDFENVSSLDEARKIAKDLGIEVEENWQVGH
IINEVFEKKVEDFLIQPTFIMDYPVEVSPLAKRKKDNPQFTERFELFITCREIANAFSEL
NDPFDQKERFLEQLKERQRGNQEAHMMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSY
SIRDVLLFPTMRPKD
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattttgagtttacacaggatgagctaaacgagcagatacaaaacaggataaaa
aaacttcgagaacttcagcagaataaatacaatccatatgaaaaggtaaaatacgacccg
acacattattctactgatattaaagagaactttgaccagtttgaaggtaagtttgtctgt
gttgcaggaagaatgctttcaaaaagaggtcatggtaaggcttcgtttgtggatattttg
gacacaaaagggaaaatccagatttatataaagattgatgaagttggagaagaaaagtat
caagagttcaaagagtattatgatattggagatataataggggtaaaaggtgaggttttc
aagactcacaaaggtgaggtctcaataaaagcaaaagagattgagatgctcaccaagtgt
ttgcgaccacttcctgaaaagtggcatggacttagagatgttgatacaaggtatagaaaa
aggtatcttgacctgattgtaaatcctcaggttcgggatacttttattaaaagaagcttg
ataatccgttcaatccgtaaatttttagatgacagaggatttttggaggtagaaactcct
gttttgagccctattgcaggtggtgctgctgcaagaccgtttattacacatcataacgcg
cttgatattgatttatatttgagaattgcaacagagcttcacttaaaaagacttatagtt
ggtggttttgacaaagtatacgagcttggtcgtgtgtttagaaatgaaggtatttcaata
aaacacaatcctgaattcacaacaattgagatttaccaggcgtatgctgattataaagat
atgatggatttaacagaagagcttatcaccacagttgcacaggaagttttgagtacatta
aaaataacatatcaaggacaggagattgacctgacaccaccatggcaaagacttactatg
gttgaagcaatcaaaaagtatgttggtgtggactttgaaaatgtttcttcgttggatgaa
gcaagaaaaattgctaaagatcttgggattgaggttgaggaaaactggcaggtaggtcat
attattaatgaggtgtttgagaaaaaggttgaggattttcttatccagccaacgtttata
atggactatccggttgaagtttctccgcttgcaaagcgcaaaaaagataatccacagttt
acagagaggtttgagctttttatcacttgcagggaaattgcaaacgcattttctgagcta
aacgacccgtttgaccagaaagagagatttttagagcagcttaaagaaaggcagagaggc
aaccaggaagcgcatatgatggatgaggattttatagaagcacttgagtacggcatgccg
ccgacaggtgggcttggaataggaattgacaggctggttatgcttctgacagattcatat
tcaattagagatgtgttacttttcccaacaatgcgaccgaaggattag
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