Caldicellulosiruptor obsidiansis: COB47_0700
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Entry
COB47_0700 CDS
T01293
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
cob
Caldicellulosiruptor obsidiansis
Pathway
cob00550
Peptidoglycan biosynthesis
cob01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
COB47_0700
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cob01011
]
COB47_0700
Peptidoglycan biosynthesis and degradation proteins [BR:
cob01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
COB47_0700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
ADL42013
UniProt:
D9TJ31
LinkDB
All DBs
Position
815194..817353
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AA seq
719 aa
AA seq
DB search
MKEASLRIKKRILFVMAVFFLSFVLLVGRLFYLQLIKGEELKKRAFSQWTRERLVAPKRG
SIVDRNGKILAMSITAETVVASLNQIKDKEWTAKVLSGILQMDYQKILNKLNTKGVSDIY
IARNIDKEKADKIRKYALPGIYLTGGTKRVYPNGNFLAQVLGFTGIDDQGLSGLELYYDK
YLRGKPGAISAQTDASGRAAPFSEEFFKKPVDGYDLMLTIDETIQHFAEKYAQKALYDNK
AKSVTIIVEKVKTGEILAMTSKPDFDPNKPFELIYKDRFPDFDKLSQAEKNKIVQSMWRN
RALTDTYEPGSTFKIVTAAAGLEEGVVNENSQFYCRGYVKVANAIIKCWRYYNPHGSENF
VEGVQNSCNPVFIEIGQRLGKEKLYKYINLFGFGQKTGIDLPGEAKGIVQPIGKVGPVEL
ATISFGQGISATPIQVISMINAVANDGVWVQPHVVKTIYDKDKKLIKSFDSPQKRRVLDQ
DVARRLRNILQSVVTNGTGHNAYLLGYRVAGKTGTSQKYDKTSKKYIASFGGFAPADNPE
VSVLVIIDEPDPSLYYGGLIAAPVARDLLNDILRYLDIQPQYTAEELKQIEFYKEYIVPS
TIGMNIEDAKKEIYNNKFNAKVIGSGDKVIDQVPKAGFMLKEGSTIILFTQEMSQTTVAV
PNVVGLSSQDAQKVLSNSLLNIKVKGIKGKIIRQNPQPGTKVPIGSIVEVEIADKENAE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaagcgtctttaaggataaaaaagagaatactttttgttatggctgtgtttttt
ttaagctttgtgttgttggtgggaagacttttttatcttcagctaattaaaggcgaagag
ctcaaaaaaagagctttttcccagtggacgcgggagaggcttgttgcacctaaaagagga
agcattgtagacaggaacggcaagatcttggcaatgtcaattacagctgagacagttgtt
gcatctttgaatcagattaaagacaaagaatggacagcaaaagtgctgtctggtattttg
cagatggactatcaaaagattttgaataagctcaatacaaaaggagtttcagacatctac
atagcacgcaatattgacaaagagaaggcagataagataagaaaatatgctctgccgggg
atttacttaacgggcgggacaaaaagggtgtatccaaacggcaattttctggctcaggtt
cttggttttacagggattgacgaccaaggactttctgggcttgaactttattatgacaag
tatcttcgcggcaagcctggcgctatttcagcacagactgatgcaagcggcagggctgca
ccgttttcggaagagttttttaaaaaacctgttgatggatatgacctaatgcttacaatt
gatgagacaatacaacattttgctgaaaagtatgctcagaaggctttgtatgataacaaa
gcaaaaagtgtaaccataattgttgaaaaggttaaaacaggcgagattctggccatgaca
tcaaaaccagattttgacccaaataaaccgtttgagcttatatacaaagataggtttcct
gattttgataagctttctcaagcagagaaaaacaagatagttcagtcaatgtggagaaac
agagcactgacagacacatatgagcctgggtcaacatttaagatagtcaccgcagctgca
ggacttgaagaaggggttgtaaatgagaattcacagttttattgcagaggttatgtaaag
gtagcaaacgcaataataaaatgctggagatattataacccgcatggcagcgagaatttt
gttgagggtgttcaaaattcgtgtaaccctgtgtttatagagatagggcagagactgggg
aaagaaaaactttataaatatataaatctttttggatttggacaaaagacaggtatagat
cttcctggtgaagcaaaaggaattgttcaaccaattggtaaggttggacctgttgagctt
gcaacaatttcttttggacaggggatttcagcaactcccattcaggttatcagcatgata
aatgcagttgcaaacgatggggtatgggtccagcctcatgttgtaaagaccatatatgat
aaggacaaaaaactgatcaagtcttttgacagcccgcaaaaaagaagagttttggaccag
gacgttgcaagaaggttaagaaatattcttcagtctgttgtaacgaacggtacaggtcat
aatgcttatcttcttggctatagagttgcaggtaaaacgggaacgtcgcaaaagtatgat
aaaacatctaaaaagtatatagcatcatttggaggttttgcaccggccgacaatccagag
gtgtcagttcttgttattatagatgaacctgacccttcactttattatggagggttaata
gctgccccagttgcaagagatttattaaatgatatactaagatatttagatatccagcca
cagtacacagctgaagaactaaaacagatagagttttataaagaatatatagtgccaagt
acaataggaatgaacattgaagatgcgaaaaaggaaatatacaataacaagttcaatgct
aaggtcataggcagtggcgacaaagtaattgaccaagttccaaaggctgggtttatgttg
aaagaaggttcaacaataatattgtttacgcaagagatgtcgcagacaactgtagctgtt
ccgaatgtagtgggcttgagttcccaggatgcacaaaaggtgctttcaaatagtcttctc
aacataaaagtgaaaggaataaaaggaaagattataagacaaaatccgcagccaggtaca
aaagttccaataggttcaattgttgaggttgaaattgctgacaaagaaaatgcggaatag
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