Caldicellulosiruptor obsidiansis: COB47_0900
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Entry
COB47_0900 CDS
T01293
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cob
Caldicellulosiruptor obsidiansis
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cob03016
]
COB47_0900
Enzymes [BR:
cob01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
COB47_0900
Transfer RNA biogenesis [BR:
cob03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
COB47_0900
Prokaryotic type
COB47_0900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
RE_HaeIII
Motif
Other DBs
NCBI-ProteinID:
ADL42209
UniProt:
D9TJM7
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All DBs
Position
1019617..1020351
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AA seq
244 aa
AA seq
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MRNILLTIEYDGTGYFGWQKQPNKKTIQGTIEEAIKKLTGEEVNLIGSGRTDRGVHALNQ
KANFKTSSKIPTDKFPLALNSVLPGDISVKDAIEVSLDFSARYSAKQKTYKYLIYNKKSR
PALLRNYAYYYPYELDVDAMQRACEYFIGEYDFKSFCSVDSESKTTVRRIYNAYLTFENE
CIAIYLTANGFLYNMARIIAGTILDVGAGKLKPMDIPLIIESKDRTLAGKTLPPWGLYLV
DVAY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaacattctcttgaccatagaatatgatggaacaggatattttgggtggcaaaaa
cagcccaataaaaagaccattcagggaacaattgaagaggctataaaaaagttgacaggt
gaagaggtaaacttgattggttctggaaggacagacagaggtgttcatgctttgaatcaa
aaagctaattttaaaacaagtagcaaaataccaacagacaagtttcctcttgctttaaat
tctgtgctgcctggcgatatatctgtaaaagacgcaattgaagtgtctttagatttttct
gcgcgatacagtgcaaagcagaagacttataagtatctcatttataacaaaaaaagtcgt
cctgcgcttttgagaaactatgcgtattattatccatacgagcttgatgttgacgctatg
caaagagcgtgtgaatattttataggagagtacgactttaaaagtttttgttctgttgat
tctgagtcaaaaacaaccgtaaggaggatatacaatgcatatttgacatttgaaaatgag
tgtattgccatatatttaacagccaatggttttctttacaacatggcaaggattattgca
gggacaatcttggatgtgggagcaggaaaattaaaaccaatggatattccgcttataata
gagagcaaagatagaaccctggcaggaaagaccttgccaccctgggggctttatcttgtg
gatgtggcttattga
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