Caldicellulosiruptor obsidiansis: COB47_1028
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Entry
COB47_1028 CDS
T01293
Name
(GenBank) ABC transporter related
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cob
Caldicellulosiruptor obsidiansis
Pathway
cob02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
COB47_1028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cob02000
]
COB47_1028
Transporters [BR:
cob02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
COB47_1028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
Zeta_toxin
AAA_21
AAA_30
AAA_16
RsgA_GTPase
SRP54
nSTAND3
TsaE
AAA_23
AAA
AAA_29
DEAD
AAA_15
AAA_25
MMR_HSR1
AAA_14
ATP-synt_ab
AAA_5
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ADL42329
UniProt:
D9TJZ7
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Position
complement(1141036..1142829)
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AA seq
597 aa
AA seq
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MSNSTKRLRIEEDEPITKPFNWSQFVRLLRYIKPYRRYFIYSFLLMILATFYNLAGPYLI
RLVIDIDIPHRNIHALMYKAVFYIVLTLLYVISLRVRTIFMTKLGNSVVSDIRMHLFTHL
QKLSLNFFDSRPAGKIMVRIMNDVDSLSELLSNSILNVLVDTLSLWAIIVIMLSIDIKLS
IVALGVLPLLISIIMILKNSIRTRWQDVRKKSSTLNAYIHESIQGMKITHAFTREEKNAE
IFKNLNTTFKNTWMKAIRVNNLFWPTIEFTGTLSSVLIFLFGIWMMRKGYTTLGTIIAFS
NYMGMFWQPINNISNFYNQLLVAMASTERIFEILDTQPDVQDSPYAYDLPPIRGEITFEN
VCFSYDEEKPVLKDVPFTIKAGETIALVGETGAGKTTIINLIARFYDPQKGRILIDGHDI
KNVTLSSLRKQMGIMLQDTFIFSGTIADNIRYAKPDATMDEVIRAAKIVNAHEFIMKMEN
GYDTEVNERGSRLSIGQRQLIAFARALLADPKILILDEATSAVDTQTEILIQQAIEKLTS
GRTSIIIAHRLSTIRNADRIFVIHDGQIVEEGSHTQLLEKKGYYYNLYTSQFKYFEK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaattccacaaaaagacttagaattgaagaagatgaaccaataacaaaacctttt
aactggtcacagtttgtaagacttttgagatatataaagccatatagaaggtactttata
tattcttttcttctaatgatacttgctacattctacaatcttgccggaccttatttgata
agattggttattgatattgatattccccacagaaacatccatgctcttatgtataaagca
gttttctatattgtgcttaccttattgtacgtaataagtcttcgcgtgagaacaatcttt
atgacaaaactcggcaacagtgtggtctcagatattcgaatgcatctttttactcatctt
caaaaactgtctctcaactttttcgacagtcgacctgcaggcaaaataatggtaagaata
atgaatgacgtggattctttatcagagcttttgtcaaatagtattttaaatgtgctggtt
gacactttaagcctttgggctatcatagtaataatgctttcaattgatataaaactatcc
attgttgcacttggtgttcttcctttgttaatctcaataatcatgatattaaaaaactca
ataaggacaagatggcaagatgttagaaagaaatcttctactctcaatgcttatatacat
gaaagcatacaaggaatgaaaataactcatgcttttacaagagaagaaaaaaacgccgaa
atatttaaaaatttaaacaccacattcaaaaatacatggatgaaagcaatcagagtaaat
aatctattttggccaaccatagaattcactggaactctttcaagcgttctcatatttctt
tttggcatctggatgatgagaaaggggtacacaacacttggtacaatcatagcattttct
aattatatgggaatgttctggcaacctatcaataacatatctaatttttacaatcagctg
ctggttgcaatggcatcaaccgaacgcatatttgaaatccttgacactcaaccagatgtt
caagacagtccatatgcatatgatttaccaccaattagaggtgaaataacatttgaaaat
gtttgcttctcatatgacgaggaaaaacctgttttaaaagatgttccattcactattaaa
gctggtgagacaattgcactcgtaggagaaacaggtgcaggaaaaaccacaataataaat
ctcatcgcaaggttttatgaccctcaaaagggaagaatcttgattgacggacatgacatt
aaaaacgtaactttgtcttctttaagaaagcaaatgggcataatgcttcaagatacattt
atattctctggtacaattgcagacaacattcgatacgcaaaacctgatgccacaatggat
gaggtaataagggctgcaaagatcgttaatgcgcacgagtttattatgaaaatggaaaac
ggatatgatacagaagtcaacgaaagaggaagccgcctctctatcggccaaagacagctc
atcgcatttgccagagcacttttagctgacccaaaaatactgatattagatgaagcaacc
tcagcagtagacactcaaacagagatcctaatccaacaggctatagaaaagctaacatcg
ggcaggacctcaattattatagctcacagactgtctaccatccgaaatgctgataggata
tttgtcatccatgatgggcagattgttgaagaaggcagtcatactcagcttcttgagaag
aaaggttattattataatctctacacctcacagttcaaatattttgaaaaataa
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