Caldicellulosiruptor obsidiansis: COB47_1152
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Entry
COB47_1152 CDS
T01293
Name
(GenBank) ABC-type bacteriocin transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
cob
Caldicellulosiruptor obsidiansis
Pathway
cob02010
ABC transporters
cob02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
COB47_1152
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
COB47_1152
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cob01002
]
COB47_1152
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cob02000
]
COB47_1152
Peptidases and inhibitors [BR:
cob01002
]
Cysteine peptidases
Family C39
COB47_1152
Transporters [BR:
cob02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
COB47_1152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
AAA_22
nSTAND3
AAA_24
DUF87
AAA_18
HUTI_composite_bact
AAA_29
AAA_16
AAA_23
DUF5906
RsgA_GTPase
NACHT
DLIC
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ADL42451
UniProt:
D9TKB9
LinkDB
All DBs
Position
1276358..1278562
Genome browser
AA seq
734 aa
AA seq
DB search
MKRRYYCVKQHDITDCAAASIATICLQYGKEVSIAKIREIAGTDRFGTTAYGVVKAAKEL
GFEAKAVRAETKEAIFEKIPLPCIAHVLVDGKLFHYVVIHEIRKESIVIADPAKGIVKLK
PEEFFKIWTGILILLVPNERFKKGKQEGVLKKFFKLLAPQKSLLLNIFAVSIVYTLLGIA
AAFYYKFLMDDVIPNLLKNTLHVIAAGTILITVFKVILGAFRVRLLIHLSQRLDIKLMLG
YYEHVIKLPMSFFGSRKIGEIISRFMDASKIRDAVSGATLTLMIDSIMALAGASILYLQN
STLFFIAFVMVLLYAAVVFGFNRVLREANRQEMEDNAILTSYLVESLNGIEVVKAFNIEE
DVSFKTESKFVKLLKDVFKVANLNNLQSNISAAIAGIGVIVILWAGANNVINGQMSIGEL
FTFNALLAYFVDPIKNLIGLQPMLQTAIVAAERLREILELESEFKEDEDKKLAPSLKGDI
EIEGLNFRYGTRQLVLRDINLKIRSGEKIAIVGESGSGKTTLAKLLLGFYDYESGEIRIN
GYNIKDINKRHLREKIAYISQDIFLFSGTIFENLVLDNRNIKMEDVIEISRLTTLDEFVS
KLPLRYNTMIEENGANLSGGQKQLIAITRALLKRPEIVIMDEATSNLDSVTEQAIGKVIE
KVCEGITTIIIAHRLSTILKCDRVVVMHEGRIVEVGTHEELMRKKGYYYNLWREQLIGLE
QKGLWDLVGSAAGK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggagatactattgtgtaaagcagcatgatataacagattgtgcggcagcgagc
atagccacaatttgtttgcaatatggaaaagaagtgtcaatagccaaaataagagagata
gcagggacagacagatttggcacaacagcatatggagttgtaaaggctgcaaaggagctt
ggatttgaagcaaaagcagtcagagcagaaacaaaagaggcaatatttgaaaaaatacca
cttccgtgtatagcgcatgtgctggtagatggcaagctatttcattatgttgtgatacat
gagataagaaaagaaagtatagtgatagcagacccagcaaaagggattgtgaagctaaag
cctgaagaattttttaaaatatggacaggcattttgatactgcttgtgccaaatgagagg
tttaaaaaaggtaagcaggagggagttttaaagaagtttttcaagttattggctccacag
aagagtttgctattgaatatttttgcagtgtctattgtatataccttgctagggatagcg
gcagcattttattacaagtttttgatggatgatgtaataccaaatcttttgaagaataca
cttcatgttatagcagcaggtacaatactgattacggtatttaaggtgatattaggagcc
ttcagggtaagacttttaatacatttgagtcagagattggatattaaactgatgctgggg
tattatgaacatgtgattaagcttccgatgagtttttttggtagcaggaagataggagag
ataatttcgaggtttatggacgcgtcaaagataagggatgcggtatcaggtgcaacgctg
acgctaatgatagacagcataatggcattggcaggcgcaagtattttatacttgcaaaat
tcaacgctgttttttatagcgtttgtgatggttttgctgtatgcggcagtagtgtttgga
tttaacagggtattgagggaagcgaacaggcaggagatggaagacaatgcaattttgacg
tcatatttggtagagtcactgaatgggatagaggtagtaaaggcatttaatatagaagag
gatgtgagttttaagacagagagcaagtttgtaaagctattaaaagatgtgtttaaggta
gcgaatttaaacaatttgcaaagtaatataagtgccgcaatagcagggataggtgttata
gtgatactgtgggcaggagcaaacaatgtaataaatgggcagatgagcataggagagctg
tttacgttcaatgcactgcttgcatactttgtagacccgataaagaacttgataggattg
cagccgatgttgcagacggcgatagttgcagccgaaaggcttagagagattttggaactt
gagagtgagtttaaagaggacgaagataagaagttagctccaagtttgaaaggtgatata
gagatagaaggtttgaactttagatacggtacaagacaacttgtgctgagggatataaat
cttaagataagaagtggagagaagatagcgatagtaggagagagtggttcagggaagacc
acattggcaaagctgcttttaggattttatgattatgagagtggagagataaggataaat
ggttataacataaaagatataaacaaaaggcatttgagggagaagatagcatatatatct
caagacatctttttgttcagtggtacgatattcgagaatttggtattggataacaggaat
ataaaaatggaagatgtgattgaaataagcagattaaccacactggatgagtttgtatca
aaacttcctttgagatataataccatgatagaagagaatggagcgaatttgtcaggcggg
cagaagcagctaatagcaataaccagggcacttttaaaaaggcctgagatagtgataatg
gatgaagcaaccagtaaccttgattctgtaaccgagcaggcgatagggaaggttatagag
aaggtatgtgaggggataacaaccataataatagcgcacaggctatcgacaatattaaag
tgtgacagggttgtggtaatgcatgaaggcaggatagtagaggtgggaacgcatgaggag
ctgatgagaaagaaaggatattattataacctgtggagagaacagctgatagggcttgag
caaaaagggctatgggatttggttgggagtgcagctggaaaatga
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