Caldicellulosiruptor obsidiansis: COB47_1222
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Entry
COB47_1222 CDS
T01293
Name
(GenBank) DNA repair protein RecN
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
cob
Caldicellulosiruptor obsidiansis
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cob03400
]
COB47_1222
DNA repair and recombination proteins [BR:
cob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
COB47_1222
TLS (translesion DNA synthesis) factors
Other SOS response factors
COB47_1222
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GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
AAA_22
DEAD
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ADL42514
UniProt:
D9TKI2
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Position
complement(1345693..1347348)
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AA seq
551 aa
AA seq
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MLKRLLIENIAIIDRLDIEFDKGLTILTGETGAGKSIIIDSLSLLLGTKFKKDVIRTGCS
KACVSAIFEIEKKSTLDALIQMGISLEDNFLIVSREVYSSGKNICRVNNQFVLLSTLREI
TKHIFEIHGQNETHLLNDKRIQLLYIDRFCGKELEELKAEYKDLYHDYQEKKRLYEQIIT
KEEERERQLDLLNYQINEIESVKPQIGEDTELEKRKEIIQNSWKLKHNSEKILDTINNTI
IDSLEMCIRLANENSRFDKEFETISERLNNVYYEIEDIVFSISKKSQNYEVNKEEIELIV
DRLDKINRLKKKYGSTIEKILEYRNNLLEEREKIKSSNEQALELKEYLSKTKTRLEEISK
KMSEIRRKKTNEFEQKVLEILSQLEMKNVKFYIKFLERELYEEGIDEVEFLIATNVGQQP
KLLSAIASGGELSRIMLAIKSIMAEKDDVELIIFDEIDSGLSGVVANKLAKLLKELSKKH
QIICITHLPQVAAAADIHYYVYKEVKENLTISNIKRLEGNESLMEIARMFSGENVTESSL
LHAKQLKSQFS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaagattattaattgaaaacattgctataattgatagacttgacattgaattt
gacaaaggtctgactatactgacaggtgaaactggtgccggcaagtctattatcattgat
tcattatccttgcttttgggtacaaaatttaaaaaagatgttataagaacaggatgttca
aaggcctgcgtgtctgcaatttttgaaattgaaaaaaagagtactcttgatgcgctgatt
caaatgggaatttctcttgaagacaattttttgattgttagccgtgaagtgtacagcagt
ggcaaaaacatctgcagggttaacaatcagtttgtattgctctcaactttaagagaaata
actaagcacatctttgaaattcatggacagaatgagactcatcttctaaacgataaaagg
attcaacttttgtacatagataggttctgtgggaaagaacttgaagagttaaaagctgag
tataaggatttataccatgattatcaagagaaaaaaaggctttatgaacagataataaca
aaagaagaagagcgggaaagacaacttgatttactaaattatcaaataaatgaaattgaa
agtgtaaaaccccaaataggtgaggatacagagcttgaaaaaagaaaagagattatccaa
aacagttggaaacttaagcacaacagtgaaaagattctcgatactattaacaacacaatc
atagattctcttgagatgtgtatcagacttgctaacgaaaattcaagatttgacaaggaa
tttgagacaatatctgaaagattgaacaacgtgtattatgaaatcgaagatatcgtattt
tctatttccaaaaaaagccagaattacgaagtgaataaagaggaaatagaactgatagtg
gataggcttgataaaataaacaggttaaagaaaaaatatggaagcacaattgaaaagata
ctggagtacagaaataatttgttagaagaaagagaaaaaatcaaaagtagtaatgaacaa
gctcttgaactaaaagagtatttgagcaaaaccaaaacaagacttgaagaaatttctaag
aaaatgtcagagatcaggcggaaaaagactaatgagtttgaacaaaaggtattagaaatt
ctttcacagcttgaaatgaaaaatgtaaagttttatattaagtttcttgaaagagagctt
tatgaagagggaattgacgaagttgaatttttgatagcaacaaacgttggtcagcagcca
aagcttctttctgccattgcttcaggcggggaactttcgagaataatgcttgcaataaaa
tccatcatggcagagaaagatgacgtggagctgatcatctttgatgagatagacagcggg
ctgagtggagttgtcgccaacaagcttgcaaaacttttaaaggagctttctaagaaacac
caaattatttgtattacacatctgccacaggttgctgctgccgcagatattcattattat
gtatataaagaggttaaagaaaacttaaccatttccaatataaaaagacttgagggaaat
gaatcgcttatggagattgccagaatgttctcaggagaaaatgttacagaaagttctctt
ctccatgcaaaacagctaaagtcccagttttcctga
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