Caldicellulosiruptor obsidiansis: COB47_1253
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Entry
COB47_1253 CDS
T01293
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cob
Caldicellulosiruptor obsidiansis
Pathway
cob00550
Peptidoglycan biosynthesis
cob01100
Metabolic pathways
cob01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
COB47_1253
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
COB47_1253
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cob01011
]
COB47_1253
Enzymes [BR:
cob01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
COB47_1253
Peptidoglycan biosynthesis and degradation proteins [BR:
cob01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
COB47_1253
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ADL42545
UniProt:
D9TKL3
LinkDB
All DBs
Position
complement(1371968..1374073)
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AA seq
701 aa
AA seq
DB search
MKILFIEKLREKNIFNRWTFLYILFISLVLILIVRLSYLQIVKGDYYYELSEKKLMQKAN
LEAPRGIIYDKNGRPLADNRPAYVLQIMKTQQLRTENQKRDFTKKIIEIVNILNKNGDKI
INQFKIDINPIRFNFGIKDKKLAKKVEIQWKKDREIPLNFSAQQAFEFLRKKFYIPENLD
LQTTLQVMAIEDMLFYNYYQMYQPVTIAIDISMKTIAEIEERRRDFSSVNIEAKAVRVYK
DAIYNAFVVGRIGKITQEQYEKFKDKGYSQDSLIGVDGIEKRCEDYLRGKDGLQLIEVDK
FGRINDVKIEKQPTKGANVYLTIDSKLQKVAYESLKKVLENIRNGDYGERFQKANSGAAV
VIDVKTGNVLALTSYPSYNPNIFIKGITTSEWNKLINDPTRPMFNRAIAGVYPPGSTFKI
LTAIAGLQEGVIKPDEKILDTGRYMYYAKSGFTPACWIWNRYHTTHGWVNVEDALKVSCN
VFFYETGRRLGIERIVKYAQLFGLGGKTGIQLDGESNGILANEENKKKIFNQPWYPGDTI
LAAIGQSINAFTPIQMASFIATVANGGTRYQVNLIDRIVDSNGKVIYKSVPKVLSKVKMY
ESTKKAVFEGMKSVTSEEGGTARQAFKDLPFTVAGKTGTSQYSNSSAAHAWFVGFAPYDN
PQIAFAIVLENGGHGSYAAYVARDIIDAYFNLPQQEEKKLP
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattgtttatagaaaagttaagagaaaaaaacatatttaacaggtggactttt
ttatacatactttttatatcccttgtgttaattcttattgtgcgcttgagctatttgcag
attgtaaagggagactattattatgagctttcagaaaagaaattaatgcaaaaagcaaac
ttggaggcaccaaggggtattatctatgataaaaatggtagaccacttgctgacaacagg
cctgcctatgttctccagattatgaaaactcagcaacttcgaactgaaaatcaaaaaaga
gactttacaaaaaagataatagaaattgtgaatattctaaataaaaatggagacaaaatt
ataaatcaatttaaaattgacataaatccaatcagatttaactttggtattaaagacaag
aaacttgcaaagaaagtagaaatccaatggaaaaaagacagagaaattcctttgaatttt
tctgcgcagcaagcttttgaatttttgagaaagaaattttatattccagaaaatcttgac
ctgcaaactactcttcaagtaatggctattgaagatatgctattttataactattatcaa
atgtatcaacctgttacaattgcaattgacatttccatgaagactattgctgagattgaa
gaaaggcgcagagatttttcgtctgtaaacatagaagcaaaggcagtaagagtttacaag
gatgcaatatacaacgcgttcgtggtaggaaggataggtaaaataactcaagaacaatac
gaaaagtttaaagacaaaggatattctcaggatagtttaattggtgttgatggaatagaa
aaaagatgcgaagattatttgcgtggtaaagatggacttcagctcattgaagttgacaaa
tttggaaggataaatgatgtcaagatagaaaaacaaccaacaaagggagcaaatgtttat
ctgaccatagattctaagcttcagaaagttgcttatgaatcgctcaaaaaagttttagag
aatataagaaatggtgattatggtgagagatttcaaaaagcaaacagcggtgctgcggtg
gtaattgatgtaaaaacaggcaatgttcttgctctcacaagttatccttcatacaatcct
aacatattcataaaaggtatcactaccagtgaatggaataagttgattaatgaccccaca
agaccaatgtttaacagggcaattgccggggtttatcctcctggttcaacttttaaaata
ctcacagcaattgcaggtcttcaggaaggtgtcatcaagccagacgaaaaaatattggat
acaggtagatatatgtattacgcaaagtcagggtttactcctgcttgctggatatggaat
agatatcatacaacacacggttgggttaatgtggaagacgctcttaaggtttcgtgtaat
gtatttttctatgagactggtagaagacttggaatagaaagaatagttaaatatgcgcaa
ttatttggattaggtgggaagacaggtattcaacttgatggagaatcaaatggaattctt
gccaatgaagagaacaaaaagaagatttttaaccaaccttggtatccaggtgatacgatt
ttagcagctattggtcagtctataaatgcatttacacctatccagatggcaagttttatt
gcaactgttgcaaatggtgggacaagatatcaagtgaacctcatagacaggattgtggat
tccaatggaaaagtcatctataagtctgtgccaaaagtactcagcaaggtaaagatgtat
gaatcaacaaaaaaggcagtttttgaagggatgaagagcgttacaagtgaagaaggagga
acggcaagacaagcgtttaaagatttgccgtttactgtagcaggaaaaacgggaacttcg
cagtattcaaactcatcagctgctcatgcatggtttgttggttttgcaccttatgataac
ccccagattgcctttgctattgttttagaaaatggtgggcatggttcatatgctgcatat
gttgcaagggatataatagatgcttattttaatttacctcagcaagaagagaaaaagctg
ccataa
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